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Job DescriptionP27127
Confidence100.00%DateThu Jan 5 11:43:14 GMT 2012
Rank15Aligned Residues318
% Identity12%Templatec2iv3B_
PDB info PDB header:transferaseChain: B: PDB Molecule:glycosyltransferase; PDBTitle: crystal structure of avigt4, a glycosyltransferase involved2 in avilamycin a biosynthesis
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10. ........20.........30.........40.........50.........60.......
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Query Sequence  MKIAFIGEAVS. . . . . . . . . . . . . GFGGMETVIRDVITTFRQQHIQSEMFFFCRNDKMDKGWLEGIKYSCSFSNIRLGFL
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Template Sequence  LKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPSPGRPGLTVVPAGE. . . . . . . . . . . . .
Template Known Secondary structure 




B
TTSSSB

SS
SSS
TT
S





TT
S

S.............
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   14.....20.........30.........40.........50.........60.........70.........80
 
   68.70.........80.........90.........100.........110.........120.........130.........140.......
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Query Sequence  RRAKHIHALSKWLQEYQPDIVICIDVISCLFAAKARKKSGIDMPVFSWPHFSLDHKKHAEYITCADYHLAISSGIKQQMI
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Template Sequence  . . . . . PEEIERWLRTADVDVVHDHSGGVIGPAGLPPGTAFISSHHFTTRPVN. . . . . . . . . . . . PVGCTYSSRAQRAHC.
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S
SSSSS
STT

TT

SSS

S
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TTS
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   83......90.........100.........110.........120......... 130.........140....
 
   148.150.........160.........170.........180.........190.........200.........210.........220.......
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Query Sequence  NRGVAESTINVIFNPVETKDSVIPAPEEGETATFIYVGRMKFEGQKRVKDLLDGLSQAKGNWKLHVLGDGSDFEKCQAYG
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Template Sequence  . . . GGGDDAPVIPIPVDPARYRSAADQVAKEDFLLFMGRVS. . PHKGALEAAAFAHACGRRLVLAGPAWEPEYFDEITRR
Template Known Secondary structure  ...T

TTS
B



B
GGGS

GGG




S
S

S..GGGTTT

S



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   145....150.........160.........170.........180.. .......190.........200.........210.........
 
   228.230.........240.........250.........260.........270.........280.........290.........300.......
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Query Sequence  RELNIDDRIVWYGWQQYPWELVQQDIEKVSALLLTSSFEGFPMTLLEALSWGIPCISADCVSGPADIIQPDVNGHLYQPG
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Template Sequence  YGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGIWCEPGATVVSEAAVSGTPVVGTG. NGCLAEIVPS. . VGEVVGYG
Template Known Secondary structure  TTTS


S











S
TT



.STTGGG..T

SS
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   220.........230.........240.........250.........260.........270........ .280........ .290......
 
   308.310.........320.........330.........340.........350.........
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Query Sequence  DIAGFVTLLNKYIAGEIHIEHEKIPASIDEFYQSKYYDRLHKVIISAISRRK
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Template Sequence  TDFAPDEARRTLAGLPAS. . DEVRRAAVRLWGHVTIAERYVEQYRRLLAGAT
Template Known Secondary structure  S


TS

..BT

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   301........310........ .320.........330.........340.........350
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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