|   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | E | R | V | A | V | V | G | A | G | Y | I | A | V | E | L | A | G | V | I | N | G | L | G | A | K | T | H | L | F | V | R | K | H | A | P | L | R | S | F | D | P | M | I | S | E | T | L | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | V | M | N | A | E | G | P | Q | L | H | T | N | A | I | P | K | A | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
A | G | R | K | V | V | V | V | G | G | G | T | G | G | A | T | A | A | K | Y | I | K | L | A | D | P | S | I | E | V | T | L | I | E | P | N | T | D | Y | Y | T | C | Y | L | S | N | E | V | I | G | G | D | R | K | L | E | S | I | K | H | G | Y | D | G | L | R | A | H | G | I | Q | V | V | H | D | S | A | T | G | I |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |
| S |
| S |
|  |  |
| S | T | T |  |  |  |  |  |  | T | S | S |
| G | G | G | G |  |  |
| S |  |  |  |  | T | T | T |  |  |  |  |
|
|
|  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
235 | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | |
. | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |
|
|
|
|
| . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | K | N | T | D | G | S | L | T | L | E | L | E | D | G | R | S | E | T | V | D | C | L | I | W | A | I | G | R | E | P | A | N | D | N | I | N | L | E | A | A | G | V | K | . |
. |
. |
. |
. |
. |
T | N | E | K | G | Y | I | V | V | D | K | Y | Q | N | . |
T | N | I | E | G | I | Y | A | V | G | D | N | T | G | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |
|   |
|   |
|
|   |   |   |   | . |
|   |   |   |   |
|
|
|   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |
Template Sequence |   |
D | P | D | K | K | . |
. |
. |
L | V | K | T | A | G | G | A | E | F | G | Y | D | R | C | V | V | A | P | G | I | E | L | I | Y | D | K | I | E | Q | R | A | G | K | I | A | Q | I | A | G | L | T | N | D | A | G | W | C | P | V | D | I | K | T | F | E | S | S | I | H | K | G | I | H | V | I | G | D | A | S | I | A |
Template Known Secondary structure |   |
| T | T | T | T | . | . | . |  |  |  |  | T | T | S |
|  |  |  |
| S |  |  |  |  |
|
|
|  |  |
|
|
| T | T |
|
|
|  |  |
|  |  |  |  |  |  | T |
|
|
| T | T | S | S |  |  | B |
| S | S | S |
| B | B | S | S | S | T | T |  |  |  |
| T | T | S |  |  |
|
Template Predicted Secondary structure |   |
 |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | |
|
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
308 | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
V | E | L | T | P | V | A | V | A | A | G | R | R | L | S | E | R | L | F |
Query Conservation |   |
. | . | . |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |
Template Sequence |   |
N | P | M | P | K | S | G | Y | S | A | N | S | Q | G | K | V | A | A | A | A | V | V |
Template Known Secondary structure |   |
T | T |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
299 | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 |
  |