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Job DescriptionP06715
Confidence99.25%DateThu Jan 5 10:59:22 GMT 2012
Rank231Aligned Residues201
% Identity13%Templatec3ps9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of mnmc from e. coli
Resolution2.54 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNW
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Template Sequence  SSKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRF. . . . . . . . . . . . . . . F
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S



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   262.......270.........280.........290.........300.........310.........320..... .
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGFF
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Template Sequence  SNAFTFARRFYDQLPVKFDHDWCGV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TQLGWDEKSQH
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   327..330.........340.........350. ........360..
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  ALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGS
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Template Sequence  KIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCW
Template Known Secondary structure  TS


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   363......370.........380.........390.........400.........410.........420.........430.........440..
 
   242.......250.........260..
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Query Sequence  LTLELEDGRSETVDCLIWAIG
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Template Sequence  . LLNFAGDQQATHSVVVLANG
Template Known Secondary structure  .TTS
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G
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   443......450.........460..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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