Job Description P06715 Confidence 100.00% Date Thu Jan 5 10:59:22 GMT 2012 Rank 44 Aligned Residues 387 % Identity 16% Template c3lxdA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:fad-dependent pyridine nucleotide-disulphide PDBTitle: crystal structure of ferredoxin reductase arr from novosphingobium2 aromaticivorans Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		T	K	H	Y	D	Y	I	A	I	G	G	G	S	G	G	I	A	S	I	N	R	A	A	M	Y	G	Q	K	.	.	C	A	L	I	E	A	K	E	L	G	G	T	C	V	N	V	G	C	V	P	K	K	V	M	W	H	A	A	Q	I	R	E	A	I	H	M	Y	G	P	D	Y	G	F	D	T	T	I	N	K	F
Query Conservation																														.	.
Alig confidence																														.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	R	A	D	V	V	I	V	G	A	G	H	G	G	A	Q	A	A	I	A	L	R	Q	N	G	F	E	G	R	V	L	V	I	G	R	E	P	E	I	P	Y	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	L	S	K	E	Y	L	A	R	E	K
Template Known Secondary structure													S													T	T			S							S	S	S	S			B		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	T	T	T	T	T	T	S	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																									.	.	.	.	.	.	.	.	.	60	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	W	E	T	L	I	A	S	R	T	A	Y	I	D	R	I	H	T	S	Y	E	N	V	L	G	K	N	N	V	D	V	I	K	G	F	A	R	F	V	D	A	K	T	L	E	V	N	G	E	T	I	T	A	D	H	I	L	I	A	T	G	G	R	P	S	H	P	D	I	P	G	V	E	Y	G	I	D	S	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	E	R	I	C	I	R	P	A	Q	F	W	E	D	K	A	V	E	M	K	L	G	A	E	V	V	S	L	D	P	A	A	H	T	V	K	L	G	D	G	S	A	I	E	Y	G	K	L	I	W	A	T	G	G	D	P	R	R	L	S	C	V	G	A	D	L	A	G	V	H	A	V	R	T	K	E	D	A	D
Template Known Secondary structure			S	G	G	G	B	S	S								T	T						T								T	T	T	T					T	T	S																				B	T	T	S	S			B	T						S
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure				.	.																																												.
Query SS confidence				.	.																																												.
Query Sequence		F	F	.	.	A	L	P	A	L	P	E	R	V	A	V	V	G	A	G	Y	I	A	V	E	L	A	G	V	I	N	G	L	G	A	K	T	H	L	F	V	R	K	H	A	P	L	R	.	S	F	D	P	M	I	S	E	T	L	V	E	V	M	N	A	E	G	P	Q	L	H	T	N	A	I	P	K	A	V	V	K
Query Conservation				.	.																																												.
Alig confidence				.	.																																												.
Template Conservation
Template Sequence		R	L	M	A	E	L	D	A	G	A	K	N	A	V	V	I	G	G	G	Y	I	G	L	E	A	A	A	V	L	T	K	F	G	V	N	V	T	L	L	E	A	L	P	R	V	L	A	R	V	A	G	E	A	L	S	E	F	Y	Q	A	E	H	R	A	H	G	V	D	L	R	T	G	A	A	M	D	C	I	E	G
Template Known Secondary structure									T	T										S													T	T								S	S	S	S	T	T	T	T	T	S															T	T						T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		N	T	D	G	S	L	T	L	E	L	E	D	G	R	S	E	T	V	D	C	L	I	W	A	I	G	R	E	P	A	N	D	N	I	N	L	E	A	A	G	V	K	T	N	E	K	G	Y	I	V	V	D	K	Y	Q	N	T	N	I	E	G	I	Y	A	V	G	D	N	T	G	A	V	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.																																		.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		D	G	T	K	V	T	G	V	R	M	Q	D	G	S	V	I	P	A	D	I	V	I	V	G	I	G	I	V	P	C	V	G	A	L	I	.	.	.	.	S	A	G	A	S	G	G	N	G	V	D	V	D	E	F	C	R	T	S	L	T	D	V	Y	A	I	G	D	C	A	A	H	A	N	D	F	A	D	G	A	V
Template Known Secondary structure		S	S	S	B							S	S	S						S						S					S						.	.	.	.		T	T				S	S	S					T	T		B		S	S	T	T					G	G	G						G	G	G	T	T
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.					.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
					309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	E	L	T	P	V	A	V	A	A	G	R	R	L	S	E	R	L	F	N	N	K	P	D	E	H	L	D	Y	S	N	I	P	T	V	V	F	S	H	P	P	I	G	T	V	G	L	T	E	P	Q	A	R	E	Q	Y	G	D	D	Q	V	K	V	Y	K	S	S	F	T	A	M	Y	T	A	V	T	T	H
Query Conservation		.	.	.
Alig confidence		.	.	.																							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	L	E	S	V	Q	N	A	N	D	M	A	T	A	A	A	K	D	I	C	G	A	P	V	.	.	P	Y	K	A	T	P	W	F	W	S	N	Q	Y	D	L	K	L	Q	T	V	G	L	S	T	G	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	V	L	R	G	D	P
Template Known Secondary structure						S																T	T				.	.													T	T										T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G
Template Predicted Secondary structure																											.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350																			.	.	.	.	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	P	C	R	M	K	L	V	C	V	G	S	E	E	K	I	V	G	I	H	G	I	G	F	G	M	D	E	M	L	Q	G	F	A	V	A	L	K	M	G	A	T	K	K	D	F	D	N	T	V	A	I
Query Conservation
Alig confidence												.	.
Template Conservation												.	.
Template Sequence		A	T	R	S	F	S	V	V	Y	L	.	.	K	G	G	K	V	V	A	L	D	C	V	N	M	V	K	D	Y	V	Q	G	K	K	L	V	E	A	R	A	Q	I	A	P	E	Q	L	A	D	A	G	V	P
Template Known Secondary structure		G	G	T								.	.		T	T									S															T									T		T	T	S
Template Predicted Secondary structure												.	.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.			.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.