Job Description P06715 Confidence 99.70% Date Thu Jan 5 10:59:22 GMT 2012 Rank 154 Aligned Residues 241 % Identity 13% Template c3ka7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of an oxidoreductase from methanosarcina2 mazei. northeast structural genomics consortium target id3 mar208 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.							60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																							.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.
Query Sequence		Y	I	A	I	G	G	G	S	G	G	I	A	S	I	N	R	A	A	M	Y	G	Q	K	C	A	L	I	E	A	K	E	L	G	G	T	C	V	N	V	G	C	V	P	K	K	V	M	W	H	A	A	Q	I	.	.	.	.	.	.	R	E	A	I	H	M	Y	G	P	D	Y	G	F	D	T	T	I	N	K	F	N
Query Conservation																																																							.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	V	I	G	A	G	L	G	G	L	L	S	A	A	R	L	S	K	A	G	H	E	V	E	V	F	E	R	L	P	I	T	G	G	R	F	T	N	L	S	Y	K	G	F	Q	L	S	S	G	A	F	H	X	L	P	N	G	P	G	G	P	L	A	C	F	L	K	E	V	E	A	S	V	N	I	V	R	S	E
Template Known Secondary structure								B													T	T								S	S	S	S	S	B	T	T	S	S					T	T					S	S	S		S		B	T	T	G	G	G	S									T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		W	E	T	L	I	A	S	R	T	A	Y	I	D	R	I	H	T	S	Y	E	N	V	L	G	K	N	N	V	D	V	I	K	G	F	A	R	F	V	D	A	K	T	L	E	V	N	G	E	T	I	T	A	D	H	I	L	I	A	T	G	G	R	P	S	H	P	D	I	P	G	V	E	Y	G	I	D	S	D	G	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	T	T	V	R	V	P	L	K	K	G	N	P	D	Y	V	K	G	F	K	D	I	S	F	N	D	F	P	S	L	L	S	Y	K	D	R	X	K	I	A	L	L	I	V	S	T	R	K	N	R	P	S	G	S	S	L	Q	A	W	I	K	S	Q	V	S	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S	T	T			S	S	T	T							G	G	G	G	G	G	G	S															T	T	T	S				S	S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	L	P	A	L	P	E	R	V	A	V	V	G	A	G	Y	I	A	V	E	L	A	G	V	I	N	G	L	G	A	K	T	H	L	F	V	R	K	H	A	P	L	R	S	F	D	P	M	I	S	E	T	L	V	E	V	M	N	A	E	G	P	Q	L	H	T	N	A	I	P	K	A	V	V	K	N	T	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	W	L	I	K	F	A	D	S	F	C	G	W	A	L	S	L	K	S	D	E	V	P	V	E	E	V	F	E	I	I	E	N	X	Y	R	F	G	G	T	G	I	P	E	G	G	C	K	G	I	I	D	A	L	E	T	V	I	S	A	N	G	G	K	I	H	T	G	Q	E	V	S	K	I	L	I	E	N	G	K
Template Known Secondary structure																	S	S		G	G	G	S	B																S					T	T	S															T	T						S										T	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	T	L	E	L	E	D	G	R	S	E	T	V	D	C	L	I	W	A	I	G
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		A	A	G	I	.	I	A	D	D	R	I	H	D	A	D	L	V	I	S	N	L	G
Template Known Secondary structure						.			T	T						S						S
Template Predicted Secondary structure						.
Template SS confidence
		229	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions