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Job DescriptionP06715
Confidence99.47%DateThu Jan 5 10:59:22 GMT 2012
Rank182Aligned Residues167
% Identity16%Templatec3da1A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: x-ray structure of the glycerol-3-phosphate dehydrogenase2 from bacillus halodurans complexed with fad. northeast3 structural genomics consortium target bhr167.
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNW
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Template Sequence  EKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEXNDFASGTS. . . SRSTKLVHGVGKERAIVYENAPHVTTPEWXLLPIF
Template Known Secondary structure  TS


STTT

SSSTT
SGG...GSS





TTT

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   16...20.........30.........40.........50....... ..60.........70.........80.........90..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGFF
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Template Sequence  KR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   108.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  ALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGS
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Template Sequence  . . . . . . . . . . . . . YXLNEKQTLEKEPLLRKENLKGGGIYVEYRTDDARLTLEIXKEAVARGAVALNYXKVESFIYDQGKV
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   137..140.........150.........160.........170.........180.........190.........200...
 
   242.......250 .........260..
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Query Sequence  LTLELEDGR. . . . . SETVDCLIWAIG
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Template Sequence  VGVVAKDRLTDTTHTIYAKKVVNAAG
Template Known Secondary structure  TTT



G
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   204.....210.........220.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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