Job Description P06715 Confidence 99.30% Date Thu Jan 5 10:59:22 GMT 2012 Rank 220 Aligned Residues 245 % Identity 12% Template c3bnuA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:polyamine oxidase fms1; PDBTitle: crystal structure of polyamine oxidase fms1 from2 saccharomyces cerevisiae in complex with bis-(3s,3's)-3 methylated spermine Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		K	H	Y	D	Y	I	A	I	G	G	G	S	G	G	I	A	S	I	N	R	A	A	M	Y	G	Q	.	K	C	A	L	I	E	A	K	E	L	G	G	T	C	V	N	V	G	C	V	P	K	K	V	M	W	H	A	A	Q	I	R	E	A	I	H	M	Y	G	P	D	Y	G	F	D	T	T	I	N	K	F	N	W
Query Conservation																												.
Alig confidence																												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	K	K	V	I	I	I	G	A	G	I	A	G	L	K	A	A	S	T	L	H	Q	N	G	I	Q	D	C	L	V	L	E	A	R	D	R	V	G	G	R	L	Q	T	V	T	G	Y	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	K	Y	D	I	G	A	S	W	H	H	D	T	L	T	N
Template Known Secondary structure												B													T	T			S						S	S	S	S	S	B	T	T							G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G					S	S							T	T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.															.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	L	I	A	S	R	T	A	Y	I	D	R	I	H	T	S	Y	E	N	V	L	G	K	N	N	V	D	V	I	K	G	F	A	R	F	V	D	A	K	T	L	E	V	N	G	E	T	I	T	A	D	H	I	L	I	A	T	G	G	R	P	S	H	P	D	I	P	G	V	E	Y	G	I	D	S	D	G	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	F	L	E	E	A	Q	L	S	L	N	D	G	R	T	R	F	V	F	D	D	D	N	F	I	Y	I	D	E	E	R	G	R	V	D	H	D	K	E	L	L	L	E	I	V	D	N	E	M	S	K	F	A	E	L	E	F	H	Q	H	L	G	V	S	D	C	S	F	F	Q	L	V	M	K	Y	L	L	Q	R
Template Known Secondary structure																															T	T	T				T	T		T	T	T																	S	S	S		S	S					B
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		A	L	P	A	L	P	E	R	V	A	V	V	G	A	G	Y	I	A	V	E	L	A	G	V	I	N	G	L	G	A	K	T	H	L	F	V	R	K	H	A	P	L	R	S	F	D	P	M	I	S	E	T	L	V	E	V	M	N	A	E	G	.	P	Q	L	H	T	N	A	I	P	K	A	V	V	K	N	T	D	G
Query Conservation																																																															.
Alig confidence																																																															.
Template Conservation
Template Sequence		R	Q	F	L	T	N	D	Q	I	R	Y	L	P	Q	L	C	R	Y	L	E	L	W	H	G	L	D	W	K	L	L	S	A	K	D	T	Y	F	G	H	Q	G	R	N	A	F	A	L	N	Y	D	S	V	V	Q	R	I	A	Q	S	F	P	Q	N	W	L	K	L	S	C	E	V	K	S	I	T	R	E	P	S	K
Template Known Secondary structure		G	G	G	S													G	G	G					T	B		T	T	T	S	B					S					S						S												T	S		G	G	G				S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	T	L	E	L	E	D	G	R	S	E	T	V	D	C	L	I	W	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	T	V	N	C	E	D	G	T	V	Y	N	A	D	Y	V	I	I	T	V
Template Known Secondary structure								T	T	S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions