Job Description P06715 Confidence 99.26% Date Thu Jan 5 10:59:22 GMT 2012 Rank 228 Aligned Residues 56 % Identity 27% Template c2hkoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: crystal structure of lsd1 Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	K	H	Y	D	Y	I	A	I	G	G	G	S	G	G	I	A	S	I	N	R	A	A	M	Y	G	Q	K	C	A	L	I	E	A	K	E	L	G	G	T	C	V	N	V	G	C	V	P	K	K	V	M	W	H	A	A	Q
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		K	T	G	K	.	.	V	I	I	I	G	S	G	V	S	G	L	A	A	A	R	Q	L	Q	S	F	G	M	D	V	T	L	L	E	A	R	D	R	V	G	G	R	V	A	T	F	R	K	G	N	Y	V	A	D	L	G	A	M
Template Known Secondary structure			S			.	.							B													T	T								S	S	S	S	S	B	S	S							T	T					S	S
Template Predicted Secondary structure						.	.
Template SS confidence
		277	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions