Return to main results Retrieve Phyre Job Id

Job DescriptionP06715
Confidence99.74%DateThu Jan 5 10:59:22 GMT 2012
Rank144Aligned Residues270
% Identity23%Templatec2e5vA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l-aspartate oxidase; PDBTitle: crystal structure of l-aspartate oxidase from2 hyperthermophilic archaeon sulfolobus tokodaii
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40 .........50.........60.........70.........80.....
Predicted Secondary structure 











.






















Query SS confidence 

































.












































Query Sequence  YIAIGGGSGGIASINRAAMYGQKCALIEAKELGG. TCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWETLI
Query Conservation 






 





  
   
  
 


     
.
                                            
Alig confidence 

































.












































Template Conservation 






 


 

  

  
  
 



    
    
 


       
  
              
           
Template Sequence  IYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSEA
Template Known Secondary structure 

STT


SSTT
SSGGG

S



STT

TT
S
Template Predicted Secondary structure 

































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
Predicted Secondary structure 



















































Query SS confidence 















































































Query Sequence  ASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGFFALPA
Query Conservation                                                                                  
Alig confidence 























........................................................
Template Conservation     
  
   

            ........................................................
Template Sequence  KNVIETFESWGFEFEEDLRLEGGH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT



SS
B

TT
........................................................
Template Predicted Secondary structure 











........................................................
Template SS confidence 















































































   82.......90.........100.....
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  LPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLE
Query Conservation          
 
                                     
   
   

 
     
  
         
 
Alig confidence  .............................


















































Template Conservation  .............................   
               
       

 
              
     
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLVEIRVKDGKVTGFVT
Template Known Secondary structure  .............................SS


SSS
TT




TT
Template Predicted Secondary structure  .............................






















Template SS confidence 















































































   106...110.........120.........130.........140.........150......
 
   246...250.........260.........270.........280..
Predicted Secondary structure 



















...........................................
Query SS confidence 




































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  LEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation     
     
 

 
 
  

                ...........................................
Alig confidence 




































...........................................
Template Conservation          









              



   
  


 
  

     
                   
   
Template Sequence  EKRGLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGEVFLLTETLRGEGAQI
Template Known Secondary structure  TTT


S




GGGSSSBSS
TT
S
TT


TT

GGG



TTT
Template Predicted Secondary structure 











































Template SS confidence 















































































   157..160.........170.........180.........190.........200.........210.........220.........230......
 
  
Predicted Secondary structure  ................................................................................
Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation 
   
                
     
  
   
  
  
    
 
              
 
    
 
      
 
Template Sequence  INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHKVFIDLSKIEDFERKFPVVAKYLARHGHNYKVKIPIFPAAHFVD
Template Known Secondary structure  TT


GGGGT
TTGGGS
T


TT
TT
TT

TTS

S
Template Predicted Secondary structure 





























Template SS confidence 















































































   237..240.........250.........260.........270.........280.........290.........300.........310......
 
   283......290.........300..... .... 310.........320.........330.........340.........350.......
Predicted Secondary structure 















.



....



















Query SS confidence 






















.



. . . .















































Query Sequence  GYIVVDKYQNTNIEGIYAVGDNT. GAVE. . . . LTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEP
Query Conservation 
 
 

    
    


 

  .    ....    
   
   
  
                          

 
  
Alig confidence 






















.



....















































Template Conservation 


 

    
 








 
 

  

 
  
 

    
 
  
   

                           
Template Sequence  GGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDSSWEGISTDDGIVHSVRISGNKTLSLK
Template Known Secondary structure 


TT
B
SSBT
GGG
SSSTTS

TTGGGTTTS






TT








Template Predicted Secondary structure 













































Template SS confidence 















































































   317..320.........330.........340.........350.........360.........370.........380.........390......
 
   358.360.
Predicted Secondary structure 
Query SS confidence 



Query Sequence  QARE
Query Conservation   
  
Alig confidence 



Template Conservation   
  
Template Sequence  EIRR
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   397..400
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions