Return to main results Retrieve Phyre Job Id

Job DescriptionP06715
Confidence100.00%DateThu Jan 5 10:59:22 GMT 2012
Rank30Aligned Residues446
% Identity38%Templatec2cfyB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:thioredoxin reductase 1; PDBTitle: crystal structure of human thioredoxin reductase 1
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30........ .40.........50.........60.........70..
Predicted Secondary structure 














.........
















Query SS confidence 




































. . . . . . . . .

































Query Sequence  TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKEL. . . . . . . . . GGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGF
Query Conservation 

 








 





  
   
  
 


    ......... 

                               
Alig confidence 




































.........

































Template Conservation    









 


 

  

  
  
 


             

     
  
   
                   
Template Sequence  SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWK
Template Known Secondary structure 

S

STTT







TT




TTSTT

Template Predicted Secondary structure 






































Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70.........80.........
 
   73......80.........90.........100.........110.........120..... ....130.........140.......
Predicted Secondary structure 




























.....
















Query SS confidence 




















































. . . . .





















Query Sequence  DTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV. . . . . NGETITADHILIATGGRPSHPD
Query Conservation                                                       .....                      
Alig confidence 




















































.....





















Template Conservation                                                                                  
Template Sequence  VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLG
Template Known Secondary structure 

SS



TT

TTTTS






S
Template Predicted Secondary structure 

































Template SS confidence 















































































   90.........100.........110.........120.........130.........140.........150.........160.........
 
   148.150... ......160.........170.........180.........190.........200.........210.........220......
Predicted Secondary structure 




.








































Query SS confidence 





.








































































Query Sequence  IPGVEY. GIDSDGFFALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLH
Query Conservation        .                    
 
                                     
   
   

 
 
Alig confidence 





.
















































.






















Template Conservation                                                          .          
   
   

 
 
Template Sequence  IPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILL. RGFDQDMANKIGEHMEEHGIKFI
Template Known Secondary structure  STT
B
TT
SS


S

STT

SS
SS.TTS
TT
Template Predicted Secondary structure 




























.







Template SS confidence 















































































   170.........180.........190.........200.........210.........220..... ....230.........240........
 
   227..230.........240 .........250.........260.........270.........280.... .....290.......
Predicted Secondary structure 




........





















.









Query SS confidence 













. . . . . . . .











































.












Query Sequence  TNAIPKAVVKNTDG. . . . . . . . SLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGY. IVVDKYQNTNIEG
Query Conservation      
  
      ........   
    
     
 

 
 
  

                
 .
 

    
    
Alig confidence 













........











































.












Template Conservation      
  
                            
 

 
 
  
                    
 

    

   
Template Sequence  RQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPY
Template Known Secondary structure  S
STT
SSSS
S
S
S
SSS
GGGTT



TTT

B


TTSB
SSTT
Template Predicted Secondary structure 












































Template SS confidence 















































































   249250.........260.........270.........280.........290.........300.........310.........320........
 
   298.300........ .310.........320.........330.........340.........350.........360.........370......
Predicted Secondary structure 






.




























Query SS confidence 










.



































































Query Sequence  IYAVGDNTGAV. ELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFT
Query Conservation 


 

     .     
   
   
  
                          

 
   
                 
Alig confidence 










.






















.











































Template Conservation 


 


          
  

  

 

      .                 
 



   
                 
Template Sequence  IYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTV. KCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFW
Template Known Secondary structure 
STTBTTS


S



.



SS


SSS



GGG
Template Predicted Secondary structure 












.





















Template SS confidence 















































































   329330.........340.........350.........360... ......370.........380.........390.........400.......
 
   377 ..380.........390...... ...400.........410.........420.........430.........440.........
Predicted Secondary structure 
.








.




















Query SS confidence 
.


















.




















































Query Sequence  A. MYTAVTTHRQPCRMKLVCV. GSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTM
Query Conservation   .              


  .     


    
             
        
       
   
     
Alig confidence 
.


















.




















































Template Conservation                  

         


    
  
   
     

    
   
       
         
Template Sequence  PLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTL
Template Known Secondary structure 
GGGTTTT

TT
GGGTTSTTTT
BS


TT
GGGGGGS
Template Predicted Secondary structure 




























Template SS confidence 










































































   408.410.........420.........430.........440.........450.........460.........470.........480..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions