Job Description P06715 Confidence 100.00% Date Thu Jan 5 10:59:22 GMT 2012 Rank 35 Aligned Residues 420 % Identity 16% Template c2cduB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nadph oxidase; PDBTitle: the crystal structure of water-forming nad(p)h oxidase from2 lactobacillus sanfranciscensis Resolution 1.8 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		M	T	K	H	Y	D	Y	I	A	I	G	G	G	S	G	G	I	A	S	I	N	R	A	A	M	Y	.	.	G	Q	K	C	A	L	I	E	A	K	E	L	G	G	T	C	V	N	V	G	C	V	P	K	K	V	M	W	H	A	A	Q	I	R	E	A	I	H	M	Y	G	P	D	Y	G	F	D	T	T	I	N	K
Query Conservation																												.	.
Alig confidence				.	.	.	.																					.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	.	.	.	.	V	I	V	V	G	C	T	H	A	G	T	F	A	V	K	Q	T	I	A	D	H	P	D	A	D	V	T	A	Y	E	M	N	D	N	I	S	F	L	S	G	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	L	G	K	E	I	K	N	N	D	P	R	G	L
Template Known Secondary structure				.	.	.	.							S															T	T								S	S	S			S	B						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T		S	G	G	G		G	G	G	G
Template Predicted Secondary structure				.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.					.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	W	E	T	L	I	A	S	R	T	A	Y	I	D	R	I	H	T	S	Y	E	N	V	L	G	K	N	N	V	D	V	I	K	G	F	A	R	F	V	D	A	K	T	L	E	V	N	G	E	T	I	T	A	D	H	I	L	I	A	T	G	G	R	P	S	H	P	D	I	P	G	V	E	Y	G	I	D	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Y	S	S	P	E	E	L	S	N	L	G	A	N	V	Q	M	R	H	Q	V	T	N	V	D	P	E	T	K	T	I	K	V	K	D	L	I	T	N	E	E	K	T	E	A	Y	D	K	L	I	M	T	T	G	S	K	P	T	V	P	P	I	P	G	I	D	S	S	R	V	Y	L	C	K	N	Y	N	D	A	K
Template Known Secondary structure		B	S									T	T						S								G	G	G	T							T	T	T									S														S		T	T	T	T	S	T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		G	F	F	A	L	P	A	L	P	E	R	V	A	V	V	G	A	G	Y	I	A	V	E	L	A	G	V	I	N	G	L	G	A	K	T	H	L	F	V	R	K	H	A	.	P	L	R	S	F	D	P	M	I	S	E	T	L	V	E	V	M	N	A	E	G	P	Q	L	H	T	N	A	I	P	K	A	V	V	K	N
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		K	L	F	E	E	A	P	K	A	K	T	I	T	I	I	G	S	G	Y	I	G	A	E	L	A	E	A	Y	S	N	Q	N	Y	N	V	N	L	I	D	G	H	E	R	V	L	Y	K	Y	F	D	K	E	F	T	D	I	L	A	K	D	Y	E	A	H	G	V	N	L	V	L	G	S	K	V	A	A	F	E	E	V
Template Known Secondary structure							G	G	G		S								S												T	T	T								S	S	S	S	T	T	T	T	T	S															T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.											.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	G	S	L	T	L	E	L	E	D	G	R	S	E	T	V	D	C	L	I	W	A	I	G	R	E	P	A	N	D	N	I	N	L	E	A	A	G	V	K	T	N	E	K	G	Y	I	V	V	D	K	Y	Q	N	T	N	I	E	G	I	Y	A	V	G	D	N	T	G	.	.	.	.	.	.	.	.	.	.	A
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.
Alig confidence						.																												.	.	.																																			.	.	.	.	.	.	.	.	.	.
Template Conservation						.																												.	.	.
Template Sequence		D	D	E	I	.	I	T	K	T	L	D	G	K	E	I	K	S	D	I	A	I	L	C	I	G	F	R	P	N	T	E	L	.	.	.	L	K	G	K	V	A	M	L	D	N	G	A	I	I	T	D	E	Y	M	H	S	S	N	R	D	I	F	A	A	G	D	S	A	A	V	H	Y	N	P	T	N	S	N	A	Y
Template Known Secondary structure		T	T			.					T	T	S						S						S							G	G	.	.	.	G	T	T	T	S		B		T	T			B				T	T	S	B		S	S	T	T					G	G	G	B					G	G	G	T
Template Predicted Secondary structure						.																												.	.	.
Template SS confidence
		221	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	L	T	P	V	A	V	A	A	G	R	R	L	S	E	R	L	F	N	N	K	P	D	E	H	L	D	Y	S	N	I	P	T	V	V	F	S	H	P	P	I	G	T	V	G	L	T	E	P	Q	A	R	E	Q	Y	G	D	D	Q	V	K	V	Y	K	S	S	F	T	A	M	Y	T	A	V	T	T	H	R	Q
Query Conservation
Alig confidence																						.																																																						.	.	.
Template Conservation																						.																																																						.	.	.
Template Sequence		I	P	L	A	T	N	A	V	R	Q	G	R	L	V	G	L	N	L	T	E	.	D	K	V	K	D	M	G	T	Q	S	S	S	G	L	K	L	Y	G	R	T	Y	V	S	T	G	I	N	T	A	L	A	K	A	N	N	L	K	V	S	E	V	I	I	A	D	N	Y	R	P	E	F	M	L	.	.	.	S	T	D
Template Known Secondary structure																		T	S	S	S	.								B									T	T																T	T												S	S		T	T	S	S	.	.	.
Template Predicted Secondary structure																						.																																																						.	.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.				370	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.		.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.																												.
Query SS confidence																										.																												.
Query Sequence		P	C	R	M	K	L	V	C	V	G	S	E	E	K	I	V	G	I	H	G	I	G	F	G	.	M	D	E	M	L	Q	G	F	A	V	A	L	K	M	G	A	T	K	K	D	F	D	N	T	V	A	I	.	H	P	T	A	A	E	E	F	V	T	M
Query Conservation																										.																												.
Alig confidence																										.																												.
Template Conservation
Template Sequence		E	V	L	M	S	L	V	Y	D	P	K	T	R	V	I	L	G	G	A	L	S	S	M	H	D	V	S	Q	S	A	N	V	L	S	V	C	I	Q	N	K	N	T	I	D	D	L	A	M	V	D	M	L	F	Q	P	Q	F	D	R	P	F	N	Y	L
Template Known Secondary structure											T	T	T		B									S	S			T												T	T		B							S						T	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.