Return to main results Retrieve Phyre Job Id

Job DescriptionP06715
Confidence99.82%DateThu Jan 5 10:59:22 GMT 2012
Rank123Aligned Residues310
% Identity16%Templatec1vqwB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:protein with similarity to flavin-containing PDBTitle: crystal structure of a protein with similarity to flavin-2 containing monooxygenases and to mammalian dimethylalanine3 monooxygenases
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20...... ...30.........40.........50.
Predicted Secondary structure 









..













...........................
Query SS confidence 

























. .
























. . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  MTKHYDYIAIGGGSGGIASINRAAMY. . GQKCALIEAKELGGTCVNVGCVPKK. . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 


 








 





  
   ..
  
 


     

          ...........................
Alig confidence 

























..
























...........................
Template Conservation   
  
 










 

  
     
  
 


     

 
                                  
Template Sequence  LPTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPS
Template Known Secondary structure 

S



STTS

S
SSSSSSGGGS

S


S


SSB

TT




B

SSS

B


Template Predicted Secondary structure 



















































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   52.......60.........70.........80.........90.........100.........110.........120........
Predicted Secondary structure  ..







































.
Query SS confidence  . .












































































.
Query Sequence  . . VMWHAAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGE.
Query Conservation  ..                                                                             .
Alig confidence  ..












































































.
Template Conservation    
  
  
       
 
 
       
     
  

   
      
   
 
  
        
            
Template Sequence  PLYRDLQTNTPIELXGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPIS
Template Known Secondary structure 


TT
B
SS
TTTSS
TTS


TT

SS
BGGGGGG
STTSSTT

Template Predicted Secondary structure 







































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   129130.........140 .........150 .........160.........170.........180.........190.......
Predicted Secondary structure 







..









.........




























Query SS confidence 











. .









. . . . . . . . .














































Query Sequence  TITADHILIATG. . GRPSHPDIPG. . . . . . . . . VEYGIDSDGFFALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFV
Query Conservation              ..          .........                       
 
                     
Alig confidence 











..









.........














































Template Conservation      
 





    
 

 



        
 
 

  
        
 




 
 

 


  
   
  
    
Template Sequence  KDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQS
Template Known Secondary structure  S


SSSSB
B


BTSTTSGGG


GGGGTT



STTTS
SS
Template Predicted Secondary structure 





























Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   198.200.........210.........220.........230.........240.........250... ......260.........270.. .
Predicted Secondary structure 





















.








...
Query SS confidence 























































.


















. . .
Query Sequence  RKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSET. VDCLIWAIGREPANDNINL. . . E
Query Conservation                  
   
   

 
     
  
         
    
    . 
 

 
 
  

      ... 
Alig confidence 







................

















...










.


















...
Template Conservation 
       ................                  ... 
   

     

 

 



    


      
Template Sequence  LLGGGDIQ. . . . . . . . . . . . . . . . NESLQQVPEITKFDPTTR. . . EIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLK
Template Known Secondary structure  TT

S
B................
SS
TTTT...TTS


S


B





S

Template Predicted Secondary structure 






................












...























Template SS confidence 















































































   243......250 .........260........ .270.........280.........290.........300...
 
   274.....280.........290.. .......300.........310.........320.........330
Predicted Secondary structure 













...
















Query SS confidence 


















. . .





































Query Sequence  AAGVKTNEKGYIVVDKYQN. . . TNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKP
Query Conservation           
 
 

    ...
    


 

          
   
   
  
     
Alig confidence 


















...









.


























Template Conservation                 

  

    
 
 


.           
 

   
    
   
Template Sequence  SPETKLIDDGSHVHNVYQHIFYIPDPTLAFVG. LALHVVPFPTSQAQAAFLARVWSGRLK
Template Known Secondary structure  STTT


SSSS


STTTTT
TT
S.

BSS
TTSS
Template Predicted Secondary structure 

























.











Template SS confidence 



























































   304.....310.........320.........330..... ....340.........350.........360..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions