Return to main results Retrieve Phyre Job Id

Job DescriptionP06715
Confidence99.43%DateThu Jan 5 10:59:22 GMT 2012
Rank192Aligned Residues180
% Identity18%Templatec1qo8A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:flavocytochrome c3 fumarate reductase; PDBTitle: the structure of the open conformation of a flavocytochrome2 c3 fumarate reductase
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50........ .60.........70...
Predicted Secondary structure 




























.......




Query SS confidence 

























































. . . . . . .














Query Sequence  MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQ. . . . . . . IREAIHMYGPDYGFD
Query Conservation 


 








 





  
   
  
 


     

                 .......               
Alig confidence 

























































.......














Template Conservation    
  







 


 


 


 
  
 



    

 
  



            
  
  
            
Template Sequence  PSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQ
Template Known Secondary structure 
S

ST


SSSSS
TTGGG

S

SS
TT



TTT
Template Predicted Secondary structure 


































Template SS confidence 















































































   118.120.........130.........140.........150.........160.........170.........180.........190.......
 
   74.....80.........90.........100.........110.........120.........130.........140.........150...
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  TTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEY
Query Conservation                                                                                  
Alig confidence 







































........................................
Template Conservation    
  

      
   
  
   

         
    ........................................
Template Sequence  QNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
S
TT





TT
SS
........................................
Template Predicted Secondary structure 



















........................................
Template SS confidence 















































































   198.200.........210.........220.........230.......
 
   154.....160.........170.........180.........190.........200.........210.........220.........230...
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  GIDSDGFFALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKA
Query Conservation                      
 
                                     
   
   

 
     
  
Alig confidence  ..........................................





































Template Conservation  ..........................................
          
  
  

       

 
   
 
  
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVK
Template Known Secondary structure  ..........................................

SSSS
TT


S
Template Predicted Secondary structure  ..........................................












Template SS confidence 















































































   238.240.........250.........260.........270.....
 
   234.....240.........250. ........260..
Predicted Secondary structure 





.....

Query SS confidence 

















. . . . .










Query Sequence  VVKNTDGSLTLELEDGRS. . . . . ETVDCLIWAIG
Query Conservation 
         
    
  .....   
 

 
 
Alig confidence 

















.....










Template Conservation 

 
    
 

           
 








Template Sequence  LVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATG
Template Known Secondary structure 
TTSBTTT


Template Predicted Secondary structure 
















Template SS confidence 

































   276...280.........290.........300.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions