Return to main results Retrieve Phyre Job Id

Job DescriptionP06715
Confidence100.00%DateThu Jan 5 10:59:22 GMT 2012
Rank1Aligned Residues448
% Identity98%Templatec1geuA_
PDB info PDB header:oxidoreductase(flavoenzyme)Chain: A: PDB Molecule:glutathione reductase; PDBTitle: anatomy of an engineered nad-binding site
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWE
Query Conservation 
 








 





  
   
  
 


     

                                         
Alig confidence 















































































Template Conservation 
 








 


 

  
   
  
 



    
                                          
Template Sequence  KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWE
Template Known Secondary structure 


STTT

SS
TTSTTTGGGT








Template Predicted Secondary structure 




































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  TLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGFFA
Query Conservation                                                                                  
Alig confidence 















































































Template Conservation                                                                                  
Template Sequence  TLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGFFA
Template Known Secondary structure  TT
S

TTTT






STTGGGSB
T
Template Predicted Secondary structure 














































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  LPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSL
Query Conservation             
 
                                     
   
   

 
     
  
        
Alig confidence 















































































Template Conservation             
                                       
   
   

 
     
  
        
Template Sequence  LPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSL
Template Known Secondary structure 
SS

S

STT

SSSSSSTTS



S


TTS
Template Predicted Secondary structure 

































Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  TLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLS
Query Conservation   
    
     
 

 
 
  

                
 
 

    
    


 

          
   
   
Alig confidence 















































































Template Conservation   
    
     
 

 
 
  

                
 
 

    
    


 

          
  

  

Template Sequence  TLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLS
Template Known Secondary structure  TTS
S
S


STT
T

B
TTS
B


TTSB
SSTT
GGGGTS


Template Predicted Secondary structure 









































Template SS confidence 















































































   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   323......330.........340.........350.........360.........370.........380.........390.........400..
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  ERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKI
Query Conservation    
                          

 
   
                                


       
Alig confidence 















































































Template Conservation    
                        
 

 
   
                                


       
Template Sequence  ERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKI
Template Known Secondary structure  TT
TT




SS



SS



GGG
TSSS

TTTT
Template Predicted Secondary structure 








































Template SS confidence 















































































   323......330.........340.........350.........360.........370.........380.........390.........400..
 
   403......410.........420.........430.........440.........450
Predicted Secondary structure 

















Query SS confidence 















































Query Sequence  VGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR
Query Conservation 

    
             
        
       
   
      
Alig confidence 















































Template Conservation 

    
  
   
      
        
       
   
      
Template Sequence  VGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR
Template Known Secondary structure  STTTT
BTS


SS
SGGGGGT

Template Predicted Secondary structure 
















Template SS confidence 















































   403......410.........420.........430.........440.........450
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions