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Job DescriptionP06715
Confidence99.40%DateThu Jan 5 10:59:22 GMT 2012
Rank203Aligned Residues255
% Identity12%Templatec1f8sA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l-amino acid oxidase; PDBTitle: crystal structure of l-amino acid oxidase from calloselasma2 rhodostoma, complexed with three molecules of o-aminobenzoate.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVG. . CVPKKVMWHAAQ. . . . IREAIHMYGPDYGFDTT
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Template Sequence  SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLN
Template Known Secondary structure  SS



BTT

SSSSSBTT

TTTTSS


TT
TT

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   76...80.........90.........100.........110.........120.........130.........140.........150.....
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Query Sequence  INKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEYGI
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Template Sequence  EFSQE. . . . . NDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRTNCSYILNKYDTYST
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TTSTT
GGGG




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GGGSB
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   111.... ....120.........130.........140.........150.........160.........170.........180.....
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  DSDGFFALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVV
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Template Sequence  KEYLIKEGDLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIFAYEKRFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQ
Template Known Secondary structure  TT


TT
GGGTTSBTT


TT
TTTGGGSS
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   186...190.........200.........210.........220.........230.........240.........250.........260.....
 
   236...240....... ..250.........260.
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Query Sequence  KNTDGSLTLELE. . . DGRSETVDCLIWAI
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Template Sequence  QNDQKVTVVYETLSKETPSVTADYVIVCT
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SSS


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   266...270.........280.........290....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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