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Job DescriptionP06715
Confidence100.00%DateThu Jan 5 10:59:22 GMT 2012
Rank12Aligned Residues443
% Identity27%Templatec1dxlC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:dihydrolipoamide dehydrogenase; PDBTitle: dihydrolipoamide dehydrogenase of glycine decarboxylase2 from pisum sativum
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE. LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFN
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Template Sequence  SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEID
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B
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Query Sequence  WETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV. . . . . NGETITADHILIATGGRPSHPDIPGVEY. .
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Template Sequence  LAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKK
Template Known Secondary structure  T
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SSSS
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
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Query Sequence  GIDSDGFFALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKA
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Template Sequence  IVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVG
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T
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
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Query Sequence  VVKNTDGS. . . . LTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVE
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Template Sequence  VDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTNVSGVYAIGDVIPGPM
Template Known Secondary structure 
B
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   310.........320.........330.........340.........350.........360.........370.........380.........
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Query Sequence  LTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPC
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Template Sequence  LAHKAEEDGVACVEYLAGKV. . GHVDYDKVPGVVYTNPEVASVGKTEEQVKETGVE. . YRVGKFPFMANSRAKAIDNAEG
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Query Sequence  RMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVT
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Template Sequence  LVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKE
Template Known Secondary structure  TTT
BTTTT
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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