Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6N8
Confidence99.91%DateThu Jan 5 11:03:36 GMT 2012
Rank12Aligned Residues57
% Identity47%Templated1ueba3
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170.........180.........
Predicted Secondary structure 





























Query SS confidence 
























































Query Sequence  VDLEIVETAPGIKGASASARNKPATLSTGLVIQVPEYLSPGEKIRIHIEERRYMGRA
Query Conservation 
 
 
 

 
  



     


 



  
 

 

  

 




 

 
  

Alig confidence 
























































Template Conservation 
 
 
 

 
 





    


 



  
 

 

  

 
 


  
 
  

Template Sequence  VELKVVDTPPGVRGDTVSGGSKPATLETGAVVQVPLFVEPGEVIKVDTRTGEYVGRA
Template Known Secondary structure 

SSS

SSSS
STTS
TT

TT
TTTT
Template Predicted Secondary structure 





























Template SS confidence 
























































   128.130.........140.........150.........160.........170.........180....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions