Job Description P0A6N8 Confidence 100.00% Date Thu Jan 5 11:03:36 GMT 2012 Rank 3 Aligned Residues 177 % Identity 29% Template c1ybyB_ PDB info PDB header:translation Chain: B: PDB Molecule:translation elongation factor p; PDBTitle: conserved hypothetical protein cth-95 from clostridium2 thermocellum Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	A	N	E	I	K	K	G	M	V	L	N	Y	N	G	K	L	L	L	V	K	D	I	D	I	Q	S	P	T	A	R	G	A	A	T	L	Y	K	M	R	F	S	D	V	R	T	G	L	K	V	E	E	R	F	K	G	D	D	I	V	D	T	V	T	L	T	R	R	Y	V	D	F	S	Y	V	D	G	N	E
Query Conservation
Alig confidence																																				.	.
Template Conservation																																				.	.
Template Sequence		I	S	A	G	D	F	K	N	G	V	T	F	E	L	D	G	Q	I	F	Q	V	I	E	F	Q	H	V	K	P	G	K	G	A	A	.	.	F	V	R	T	K	L	K	N	I	V	T	G	A	T	I	E	K	T	F	N	P	T	D	K	X	P	K	A	H	I	E	R	K	D	X	Q	Y	L	Y	N	D	G	D	L
Template Known Secondary structure				G	G	G			T	T						S	S														S	S	S			.	.									T	T	T										T	T					B															T	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	F	M	D	K	E	D	Y	T	P	Y	T	F	T	K	D	Q	I	E	E	E	L	L	F	M	P	E	G	G	M	P	D	M	Q	V	L	T	W	D	G	Q	L	L	A	L	E	L	P	Q	T	V	D	L	E	I	V	E	T	A	P	G	I	K	G	A	S	A	S	A	R	N	K	P	A	T	L	S	T	G
Query Conservation
Alig confidence																																	.	.																															.	.	.	.	.	.	.
Template Conservation																																	.	.																															.	.	.	.	.	.	.
Template Sequence		Y	Y	F	X	D	T	E	T	F	E	Q	L	P	L	G	K	D	K	I	G	D	A	L	K	F	V	K	E	N	E	I	.	.	V	K	V	L	S	H	K	G	N	V	F	G	I	E	P	P	N	F	V	E	L	E	V	T	D	T	E	P	G	F	.	.	.	.	.	.	.	A	T	K	P	A	I	V	E	T	G
Template Known Secondary structure							T	T	T												T	T	T	T	T	T			T	T			.	.						S	S	S									S														.	.	.	.	.	.	.								T	T	S
Template Predicted Secondary structure																																	.	.																															.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140								.	.	.	.	.	.	.	.	.	150
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	I	Q	V	P	E	Y	L	S	P	G	E	K	I	R	I	H	I	E	E	R	R	Y	M	G	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	I	K	V	P	L	F	V	N	K	G	D	I	I	R	I	D	T	R	T	G	E	Y	X	E	R	V
Template Known Secondary structure								T	T			T	T							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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