Job Description P0A6N8 Confidence 100.00% Date Thu Jan 5 11:03:36 GMT 2012 Rank 2 Aligned Residues 178 % Identity 31% Template c1uebB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:elongation factor p; PDBTitle: crystal structure of translation elongation factor p from2 thermus thermophilus hb8 Resolution 1.65 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	R	A	N	E	I	K	K	G	M	V	L	N	Y	N	G	K	L	L	L	V	K	D	I	D	I	Q	S	P	T	A	R	G	A	A	T	L	Y	K	M	R	F	S	D	V	R	T	G	L	K	V	E	E	R	F	K	G	D	D	I	V	D	T	V	T	L	T	R	R	Y	V	D	F	S	Y	V	D	G	N
Query Conservation
Alig confidence																																					.	.
Template Conservation																																					.	.
Template Sequence		M	I	S	V	T	D	L	R	P	G	T	K	V	K	M	D	G	G	L	W	E	C	V	E	Y	Q	H	Q	K	L	G	R	G	G	A	.	.	K	V	V	A	K	F	K	N	L	E	T	G	A	T	V	E	R	T	F	N	S	G	E	K	L	E	D	I	Y	V	E	T	R	E	L	Q	Y	L	Y	P	E	G	E
Template Known Secondary structure					G	G	G			T	T						T	T														T	T	S			.	.									S	S	S	S									T	T																				T	T
Template Predicted Secondary structure																																					.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	V	F	M	D	K	E	D	Y	T	P	Y	T	F	T	K	D	Q	I	E	E	E	L	L	F	M	P	E	G	G	M	P	D	M	Q	V	L	T	W	D	G	Q	L	L	A	L	E	L	P	Q	T	V	D	L	E	I	V	E	T	A	P	G	I	K	G	A	S	A	S	A	R	N	K	P	A	T	L	S	T
Query Conservation
Alig confidence																									.									.	.																																	.	.	.	.	.	.
Template Conservation																									.									.	.																																	.	.	.	.	.	.
Template Sequence		E	M	V	F	M	D	L	E	T	Y	E	Q	F	A	V	P	R	S	R	V	V	G	A	.	E	F	F	K	E	G	M	T	.	.	A	L	G	D	M	Y	E	G	Q	P	I	K	V	T	P	P	T	V	V	E	L	K	V	V	D	T	P	P	G	S	G	G	.	.	.	.	.	.	S	K	P	A	T	L	E	T
Template Known Secondary structure								T	T	T								G	G	G	B	T	T	G	.	G	G			T	T			.	.							T	T									S														T	T	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																									.									.	.																																	.	.	.	.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.							.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	V	I	Q	V	P	E	Y	L	S	P	G	E	K	I	R	I	H	I	E	E	R	R	Y	M	G	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	V	V	Q	V	P	L	F	V	E	P	G	E	V	I	K	V	D	T	R	T	G	E	Y	V	G	R	A
Template Known Secondary structure		S							T	T			T	T							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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