Job Description P0A6N8 Confidence 100.00% Date Thu Jan 5 11:03:36 GMT 2012 Rank 5 Aligned Residues 126 % Identity 15% Template c1iz6B_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:initiation factor 5a; PDBTitle: crystal structure of translation initiation factor 5a from pyrococcus2 horikoshii Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	A	N	E	I	K	K	G	M	V	L	N	Y	N	G	K	L	L	L	V	K	D	I	D	I	Q	S	P	T	A	R	G	A	A	T	L	Y	K	M	R	F	S	D	V	R	T	G	L	K	V	E	E	R	F	K	G	D	D	I	V	D	T	V	T	L	T	R	R	Y	V	D	F	S	Y	V	D	G	N	E
Query Conservation
Alig confidence																																					.
Template Conservation																																					.
Template Sequence		V	Q	V	S	K	L	K	P	G	R	Y	I	I	I	D	D	E	P	C	R	I	V	N	I	T	V	S	S	P	G	K	H	G	S	A	.	K	A	R	I	E	A	V	G	I	F	D	G	K	V	R	S	I	V	K	P	T	S	A	E	V	D	V	P	I	I	D	K	K	T	A	Q	V	I	A	I	T	P	D	T
Template Known Secondary structure				G	G	G			T	T						T	T												S	S		S	S	S	S	S	.									T	T	T										T	T	S																			S	S
Template Predicted Secondary structure																																					.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		Y	V	F	M	D	K	E	D	Y	T	P	Y	T	F	T	K	D	.	.	Q	I	E	E	E	L	L	F	M	P	E	G	G	M	P	D	M	Q	V	L	T	W	D	G	Q	L	L	A	L	E	L	P
Query Conservation																			.	.
Alig confidence																			.	.															.	.
Template Conservation																																			.	.
Template Sequence		V	Q	I	M	D	M	E	T	Y	E	T	F	E	V	P	I	D	T	G	V	A	D	E	I	R	D	Q	L	K	E	G	I	N	.	.	V	E	Y	W	E	T	L	G	R	I	K	I	M	R	I	K
Template Known Secondary structure							T	T	T								T	T	T	T	B						T	T			T	T			.	.							T	T
Template Predicted Secondary structure																																			.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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