Job Description P0A6N8 Confidence 11.39% Date Thu Jan 5 11:03:36 GMT 2012 Rank 87 Aligned Residues 132 % Identity 8% Template c1cr5B_ PDB info PDB header:endocytosis/exocytosis Chain: B: PDB Molecule:sec18p (residues 22 - 210); PDBTitle: n-terminal domain of sec18p Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		P	R	A	N	E	I	K	K	G	M	V	L	N	Y	N	G	K	.	L	L	L	V	K	D	I	D	I	Q	S	P	T	A	R	G	A	A	T	L	Y	K	M	R	F	S	D	V	R	T	G	L	K	V	E	E	R	F	K	G	D	D	I	V	D	T	V	T	L	T	R	R	Y	V	D	F	S	Y	V	D	G	N
Query Conservation																			.
Alig confidence																			.																							.																																				.	.	.	.
Template Conservation																																										.																																				.	.	.	.
Template Sequence		V	S	P	N	D	F	P	N	N	I	Y	I	I	I	D	N	L	F	V	F	T	T	R	H	S	N	D	I	P	P	G	T	I	G	F	N	G	N	Q	R	.	T	W	G	G	W	S	L	N	Q	D	V	Q	A	K	A	F	D	L	F	K	Y	S	G	K	Q	S	Y	L	G	S	I	D	I	D	I	.	.	.	.
Template Known Secondary structure				T	T	T	S		S	S						T	T	T									T	T	S		T	T										.				T			T	T														S	G	G	G		B									.	.	.	.
Template Predicted Secondary structure																																										.																																				.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.							.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		E	Y	V	F	M	D	K	E	D	Y	T	P	Y	T	F	T	K	D	Q	I	E	E	E	L	L	.	.	.	.	.	.	F	M	P	E	G	G	M	P	D	M	Q	V	L	T	W	D	G	Q	L	L	A	L	E	L	P	Q	T	V	D	L	E	I	V	E	T	A	P	G	I	K	G	A	S	A	S	A	R	N	K
Query Conservation																											.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.						.	.	.																.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																										.	.	.																.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	S	F	R	A	D	Q	D	E	L	A	K	Q	F	V	R	C	Y	E	S	Q	I	F	S	P	T	.	.	.	Q	Y	L	I	M	E	F	Q	G	H	F	F	D	L	K	.	.	.	.	.	I	R	N	V	Q	A	I	D	L	G	D	I	E	P	T	S	A	V	A	T	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.																		T	T					T	T	.	.	.								T	T							.	.	.	.	.									T	T		S	S			S			B		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																										.	.	.																.	.	.	.	.
Template SS confidence
													122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		155	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	T
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions