Job Description P33355 Confidence 86.57% Date Thu Jan 5 11:51:57 GMT 2012 Rank 1 Aligned Residues 109 % Identity 13% Template c3sibA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:ure3-bp sequence specific dna binding protein; PDBTitle: crystal structure of ure3-binding protein, wild-type Resolution 1.90 Å

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		7	.	.	10	.	.	.	.	.										.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.
Query Sequence		L	R	S	V	R	Y	I	L	K	.	.	.	.	.	.	.	.	.	A	N	N	N	D	L	V	R	I	L	A	L	G	N	V	E	A	T	A	E	Q	I	A	V	W	L	R	K	E	D	E	E	G	F	Q	R	C	P	D	I	V	L	S	S	F	L	N	G	L	I	Y	E	K	R	G	K	D	E	S	A	P	A
Query Conservation											.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	T	R	I	Y	Q	W	F	M	G	V	D	R	D	R	S	G	T	L	E	I	N	E	L	M	M	G	Q	F	P	G	G	I	R	L	S	P	Q	T	A	L	R	M	M	R	I	F	D	T	D	F	N	G	H	I	S	F	Y	E	F	M	A	M	Y	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T			S	S	B											G	G	G																	T	T		S	S		B											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.										.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.
Query Sequence		L	E	P	E	R	R	I	N	N	N	I	V	L	K	K	L	R	I	A	F	.	.	.	.	.	.	.	.	.	S	L	K	T	D	D	I	L	A	I	L	T	E	Q	Q	F	R	V	S	M	P	E	I	T	A	M	M	R	A	P	D	H	K	N	F	R	E	C	G	D	Q	F	L	R
Query Conservation																						.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	F	M	E	L	A	Y	N	L	F	V	M	N	D	R	N	R	S	G	T	L	E	P	H	E	I	L	P	A	L	Q	Q	L	G	F	Y	I	N	Q	R	T	S	L	L	L	H	R	L	F	A	R	G	M	A	F	C	D	L	N	C	W	I	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.														T	T			S				G	G	G									T																S	T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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