Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGI8
Confidence97.78%DateThu Jan 5 11:29:17 GMT 2012
Rank108Aligned Residues112
% Identity17%Templated1ldma1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   225....230.........240.........250. .... ....260.........270.........280.........290.........300.
Predicted Secondary structure 










.


..


















Query SS confidence 


























.



. .













































Query Sequence  LQRLEKPYKRIMLVGGGNIGAGLARRL. EKDY. . SVKLIERNQQRAAELAEKLQNTIVFFGDASDQELLAEEHIDQVDLF
Query Conservation            


 
 
  
  

  
.    .. 




 
               

 

 

   
  
 
  
  
Alig confidence 


























.



..













































Template Conservation      
    







 

  

  
       



 
           

                    
  



Template Sequence  TSQEPRSYNKITVVGVGAVGMACAISILMKDLADEVALVDVMEDKLKGEMMDLQHGSLFLHTAKIVSGKDYSVSAGSKLV
Template Known Secondary structure 






SS

STT

S
S
TTGGG




SSGGGGTT
S
Template Predicted Secondary structure 





























Template SS confidence 















































































   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   302...... .310.... .....320.........330......
Predicted Secondary structure 




...............




Query SS confidence 






. . . . . . . . . . .





. . . .





















Query Sequence  IAVTNDD. . . . . . . . . . . EANIMS. . . . AMLAKRMGAKKVMVLIQRRAYV
Query Conservation 
     
...........  

  ....   

      


        
Alig confidence 






...........





....





















Template Conservation 


 
        
      
  
   
   
    
 
 








 
Template Sequence  VITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCIILVVSNPVDV
Template Known Secondary structure 

S



TT

GGGG
TT

SSS
Template Predicted Secondary structure 















Template SS confidence 

















































   93......100.........110.........120.........130.........140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions