 |
Job Description | P0AGI8 | Confidence | 96.67% | Date | Thu Jan 5 11:29:17 GMT 2012 |
Rank | 349 | Aligned Residues | 59 |
% Identity | 22% | Template | c3o38D_ |
PDB info |
PDB header:oxidoreductase | Chain: D: PDB Molecule:short chain dehydrogenase; |
PDBTitle: crystal structure of a short chain dehydrogenase from mycobacterium2 smegmatis
|
Resolution | 1.95 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | |
. | 10 | |
. | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
| . |
|  | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | I | I | I | L | G | A | . |
G | Q | . |
V | G | G | T | L | A | E | N | L | V | G | E | N | N | D | I | T | V | V | D | T | N | G | E | R | L | R | T | L | Q | D | K | . |
. |
. |
. |
. |
. |
F | D | L | R | V | V | Q | G | H | G | S | H | P | R | V | L | R | E |
Query Conservation |   |
  |
|
|
|   |
|   | . |
|   | . |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|   |
|
|
|
|   |
|   |
|   |   |
|
|   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | V | L | V | T | A | A | A | G | T | G | I | G | S | T | T | A | R | R | A | L | L | E | G | A | D | V | V | I | S | D | Y | H | E | R | R | L | G | E | T | R | D | Q | L | A | D | L | G | L | G | R | V | E | A | V | V | C | D | V | T | S | T | E | A | V | D | A |
Template Known Secondary structure |   |
 |  |  |  | S | S |
| S | S | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |
|  |  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|