Job Description P0AGI8 Confidence 99.90% Date Thu Jan 5 11:29:17 GMT 2012 Rank 15 Aligned Residues 140 % Identity 14% Template c3c85A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative glutathione-regulated potassium-efflux system PDBTitle: crystal structure of trka domain of putative glutathione-regulated2 potassium-efflux kefb from vibrio parahaemolyticus Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.																																							.
Query SS confidence																							.																																							.
Query Sequence		K	I	I	I	L	G	A	G	Q	V	G	G	T	L	A	E	N	L	V	G	E	.	N	N	D	I	T	V	V	D	T	N	G	E	R	L	R	T	L	Q	D	K	F	D	L	R	V	V	Q	G	H	G	S	H	P	R	V	L	R	E	.	A	G	A	D	D	A	D	M	L	V	A	V	T	S	S	D	E	T	N
Query Conservation																							.																																							.
Alig confidence																							.																					.																		.
Template Conservation																																												.
Template Sequence		Q	V	L	I	L	G	X	G	R	I	G	T	G	A	Y	D	E	L	R	A	R	Y	G	K	I	S	L	G	I	E	I	R	E	E	A	A	Q	Q	H	R	S	E	.	G	R	N	V	I	S	G	D	A	T	D	P	D	F	W	E	R	I	L	D	T	G	H	V	K	L	V	L	L	A	X	P	H	H	Q	G	N
Template Known Secondary structure		S							S																S							S											T	.	T								T	T							T	B		S												S	S
Template Predicted Secondary structure																																												.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	A	C	Q	V	A	Y	S	L	F	N	T	P	N	R	I	A	R	I	R	S	P	D	Y	V	R	D	A	D	K	L	F	H	S	D	A	V	P	I	D	H	L	I	A	P	E	Q	L	V	I	D	N	I	Y	R	L	I	E	Y	P	G	A	L	Q	V	V	N	F
Query Conservation
Alig confidence																																		.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.
Template Sequence		Q	T	A	L	E	Q	L	Q	R	R	N	Y	K	G	Q	I	A	A	I	A	E	Y	P	D	Q	L	E	G	L	L	E	S	.	.	.	.	.	.	G	V	D	A	A	F	N	I	Y	S	E	A	G	S	G	F	A	R	H	V	C	K	Q	L	E	P	Q	F	T	S	I
Template Known Secondary structure											T	T			S							S	S											.	.	.	.	.	.	T		S
Template Predicted Secondary structure																																		.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.							.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions