Job Description P0AGI8 Confidence 96.27% Date Thu Jan 5 11:29:17 GMT 2012 Rank 451 Aligned Residues 97 % Identity 16% Template c3bwbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of the apo form of spermidine synthase from2 trypanosoma cruzi at 2.5 a resolution Resolution 2.50 Å

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		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.										.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.																						.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.																						.	.	.	.	.	.	.	.	.
Query Sequence		K	P	Y	K	R	I	M	L	V	G	G	G	N	I	G	A	G	L	A	R	R	L	E	K	.	.	D	Y	S	V	K	L	I	E	R	N	Q	Q	R	A	A	E	L	A	E	K	L	.	.	.	.	.	.	.	.	.	Q	N	T	I	V	F	F	G	D	A	S	D	Q	E	L	L	A	E	E	H	I	D	Q	V
Query Conservation																										.	.																						.	.	.	.	.	.	.	.	.
Alig confidence															.											.	.																						.	.	.	.	.	.	.	.	.											.	.
Template Conservation															.																																																					.	.
Template Sequence		P	K	P	E	R	V	L	I	I	G	G	G	D	.	G	G	V	L	R	E	V	L	R	H	G	T	V	E	H	C	D	L	V	D	I	D	G	E	V	X	E	Q	S	K	Q	H	F	P	Q	I	S	R	S	L	A	D	P	R	A	T	V	R	V	G	D	G	.	.	L	A	F	V	R	Q	T	P	D	N	T	Y
Template Known Secondary structure		S											T	T	.	S							T	T		T	T									S																	G	G	G	G		T	T						S			.	.						T	S		T	T
Template Predicted Secondary structure															.																																																					.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170
		299	300	.	.	.	.	.	.	.	.	.	310	.	.					.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		D	L	F	I	A	V	T	N	D	D	E	A	N	I	.	.	.	.	M	S	A	M	L	A	K	R	M	G	A	K	K	V	M	V	L
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.
Template Conservation
Template Sequence		D	V	V	I	I	D	T	T	D	P	A	S	K	L	F	G	E	A	F	Y	K	D	V	L	R	I	L	K	P	D	G	I	C	C	N
Template Known Secondary structure									S						S	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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