Job Description P0AGI8 Confidence 97.83% Date Thu Jan 5 11:29:17 GMT 2012 Rank 97 Aligned Residues 75 % Identity 23% Template c2uyyD_ PDB info PDB header:cytokine Chain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac Resolution 2.5 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I	I	I	L	G	A	G	Q	V	G	G	T	L	A	E	N	L	V	G	E	N	N	D	I	T	V	V	D	T	N	G	E	R	L	R	T	L	Q	D	K	F	D	L	R	V	V	Q	G	H	G	S	H	P	R	V	L	R	E	A	G	A	D	D	A	D	M	L	V	A	V	T	S	S	D	E	T	N	M
Query Conservation
Alig confidence																																												.					.	.	.	.								.	.	.	.
Template Conservation																																												.					.	.	.	.								.	.	.	.
Template Sequence		K	K	I	G	F	L	G	L	G	L	M	G	S	G	I	V	S	N	L	L	K	M	G	H	T	V	T	V	W	N	R	T	A	E	K	C	D	L	F	I	Q	E	.	G	A	R	L	.	.	.	.	G	R	T	P	A	E	V	.	.	.	.	V	S	T	C	D	I	T	F	A	C	V	S	D	P	K	A	A	K
Template Known Secondary structure		S								S													T	T								S	S	G	G	G	G						T	.	T				.	.	.	.		S						.	.	.	.					S							S	S
Template Predicted Secondary structure																																												.					.	.	.	.								.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.					.	.	.	.	.	.	320					.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		81	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	C	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions