Job Description P0AGI8 Confidence 100.00% Date Thu Jan 5 11:29:17 GMT 2012 Rank 4 Aligned Residues 216 % Identity 15% Template c2fy8A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:calcium-gated potassium channel mthk; PDBTitle: crystal structure of mthk rck domain in its ligand-free gating-ring2 form Resolution 2.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	I	I	L	G	A	G	Q	V	G	G	T	L	A	E	N	L	V	G	E	N	N	D	I	T	V	V	D	T	N	G	E	R	L	R	T	L	Q	D	K	F	D	L	R	V	V	Q	G	H	G	S	H	P	R	V	L	R	E	A	G	A	D	D	A	D	M	L	V	A	V	T	S	S	D	E	T	N	M	V
Query Conservation
Alig confidence																				.	.																						.
Template Conservation																				.	.																						.
Template Sequence		H	V	V	I	C	G	W	S	E	S	T	L	E	C	L	R	E	L	.	.	R	G	S	E	V	F	V	L	A	E	D	E	N	V	R	K	K	V	L	R	S	.	G	A	N	F	V	H	G	D	P	T	R	V	S	D	L	E	K	A	N	V	R	G	A	R	A	V	I	V	N	L	E	S	D	S	E	T	I	H
Template Known Secondary structure							S											T	S	.	.		G	G	G						S		T	T								T	.	T						S		T	T	S							T	T		T	T		S							S	S
Template Predicted Secondary structure																				.	.																						.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		A	C	Q	V	A	Y	S	L	F	N	T	P	N	R	I	A	R	I	R	S	P	D	Y	V	R	D	A	D	K	L	F	H	S	D	A	V	P	I	D	H	L	I	A	P	E	Q	L	V	I	D	N	I	Y	R	L	I	E	Y	P	G	A	L	Q	V	V	N	F	.	.	.	A	E	G	K	V	S	L	A	V	V
Query Conservation																																																																					.	.	.
Alig confidence																																.	.	.	.	.	.																																.	.	.
Template Conservation																																.	.	.	.	.	.
Template Sequence		C	I	L	G	I	R	K	I	D	E	S	V	R	I	I	A	E	A	E	R	Y	E	N	I	E	Q	L	R	M	A	.	.	.	.	.	.	G	A	D	Q	V	I	S	P	F	V	I	S	G	R	L	M	S	R	S	I	D	D	G	Y	E	A	M	F	V	Q	D	V	L	A	E	E	S	T	R	R	M	V	E	V
Template Known Secondary structure											S	S	S							S	S	G	G	G								.	.	.	.	.	.			S																T	T	T	T												T	S		S	S
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.							.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	Y	Y	G	G	P	L	I	G	N	A	L	S	T	M	R	E	H	M	P	H	I	D	T	R	V	A	A	I	F	R	H	D	R	P	I	R	P	Q	G	S	T	I	V	E	A	G	D	E	V	F	F	I	A	A	S	Q	H	I	R	A	V	M	S	E	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	P	E	G	S	K	L	E	G	V	S	V	L	D	A	D	I	H	D	V	T	G	V	I	I	I	G	V	G	R	G	D	E	L	I	I	D	P	P	R	D	Y	S	F	R	A	G	D	I	I	L	G	I	G	K	P	E	E	I	E	R	L	K	N	Y	I	S
Template Known Secondary structure					S	S	S	T	T	T	T		B											S									T	T					S			T	T		B			T	T
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions