Job Description P0AGI8 Confidence 96.09% Date Thu Jan 5 11:29:17 GMT 2012 Rank 498 Aligned Residues 102 % Identity 15% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																							.	.										.
Query SS confidence																																							.	.										.
Query Sequence		S	Q	H	I	R	A	V	M	S	E	L	Q	R	L	E	K	P	Y	K	R	I	M	L	V	G	G	G	N	I	G	A	G	L	A	R	R	L	.	.	E	K	D	Y	S	V	K	L	I	.	E	R	N	Q	Q	R	A	A	E	L	A	E	K	L	Q	N	T	I	V	F	F	G	D	A	S	D	Q	E	L	L	A
Query Conservation																																							.	.										.
Alig confidence														.	.																								.	.										.							.	.	.												.	.	.	.	.
Template Conservation														.	.																																										.	.	.												.	.	.	.	.
Template Sequence		P	V	L	K	R	E	L	R	H	I	L	G	.	.	L	N	R	K	W	G	L	C	I	V	G	M	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	E	S	F	E	L	R	G	F	F	D	V	D	P	E	K	.	.	.	V	G	R	P	V	R	G	G	V	I	E	.	.	.	.	.	H	V	D	L	L	P
Template Known Secondary structure													T	.	.	T	T	S										S										S				S	S									S		T	T	T	.	.	.	T	T				T	T					.	.	.	.	.		G	G	G
Template Predicted Secondary structure														.	.																																										.	.	.												.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	H	I	D	Q	V	D	L	F	I	A	V	T	N	D	D	E	A	N	I	M	S	A	M	L	A	K	R	M	G	A	K	K	V	M
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		Q	R	V	P	G	R	I	E	I	A	L	L	T	V	P	R	E	A	A	Q	.	K	A	A	D	L	L	V	A	A	G	I	K	G	I	L
Template Known Secondary structure				S	T	T	T								S							.										T
Template Predicted Secondary structure																						.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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