Job Description P0AGI8 Confidence 96.53% Date Thu Jan 5 11:29:17 GMT 2012 Rank 386 Aligned Residues 109 % Identity 15% Template c1pzfD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:lactate dehydrogenase; PDBTitle: t.gondii ldh1 ternary complex with apad+ and oxalate Resolution 2.20 Å

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		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																										.				.																																		.	.
Query SS confidence																										.				.																																		.	.
Query Sequence		L	E	K	P	Y	K	R	I	M	L	V	G	G	G	N	I	G	A	G	L	A	R	R	L	.	E	K	D	.	Y	S	V	K	L	I	E	R	N	Q	Q	R	A	A	E	L	A	E	K	L	Q	N	T	I	V	F	F	G	D	A	S	D	Q	.	.	E	L	L	A	E	E	H	I	D	Q	V	D	L	F	I	A
Query Conservation																										.				.																																		.	.
Alig confidence																										.				.																																		.	.
Template Conservation
Template Sequence		L	V	Q	R	R	K	K	V	A	M	I	G	S	G	M	I	G	G	T	M	G	Y	L	C	A	L	R	E	L	A	D	V	V	L	Y	D	V	V	K	G	M	P	E	G	K	A	L	D	L	S	H	V	T	S	V	V	D	T	N	V	S	V	R	A	E	Y	S	Y	E	A	A	L	T	G	A	D	C	V	I	V
Template Known Secondary structure				S									S		S														T									S	S	S	S																T	T										S						T	T		S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		304	.	.	.	.	.	310																					.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	N	D	D	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	M	S	A	M	L	A	K	R	M	G	A	K	K	V	M	V	L	I	Q	R	R	A	Y	V
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	G	L	T	K	V	P	G	K	P	D	S	E	W	S	R	N	D	L	L	P	F	N	S	K	I	I	R	E	I	G	Q	N	I	K	K	Y	C	P	K	T	F	I	I	V	V	T	N	P	L	D	C
Template Known Secondary structure				S		S	S		T	T			G	G	G			S	G	G	G																				T	T	S							S	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions