Job Description P0ABJ1 Confidence 99.60% Date Thu Jan 5 11:15:35 GMT 2012 Rank 20 Aligned Residues 95 % Identity 13% Template d3ehbb2 SCOP info Transmembrane helix hairpin Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Resolution 2.32

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.							.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		L	S	G	C	N	S	A	.	.	.	.	.	.	L	L	D	P	K	G	Q	I	G	L	E	Q	R	S	L	I	L	T	A	F	G	L	M	L	I	V	V	I	P	A	I	L	M	A	V	G	F	A	W	K	Y	R	A	S	N	K	D	A	K	Y	S	P	N	W	S	H	S	N	K	V	E	A	V	V	W	T	V
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.																																																.	.
Template Conservation																																																														.	.
Template Sequence		L	P	V	I	G	K	P	V	N	G	G	M	N	F	Q	P	A	S	S	P	L	A	H	D	Q	Q	W	L	D	H	F	V	L	Y	I	I	T	A	V	T	I	F	V	C	L	L	L	L	I	C	I	V	R	F	N	R	R	A	N	P	.	.	V	P	A	R	F	T	H	N	T	P	I	E	V	I	W	T	L	V
Template Known Secondary structure						S				T	T			S						S																																			S	S	T	T	T	S	S	.	.	S
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	L	I	I	I	F	L	A	V	L	T	W	K	T	T	H	A	L	E	P	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	L	I	L	V	A	I	G	A	F	S	L	P	I	L	F	R	S	Q	E	M	P
Template Known Secondary structure																						S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions