Job Description P0ABJ1 Confidence 100.00% Date Thu Jan 5 11:15:35 GMT 2012 Rank 11 Aligned Residues 114 % Identity 27% Template d3dtub1 SCOP info Cupredoxin-like Cupredoxins Periplasmic domain of cytochrome c oxidase subunit II Resolution 2.15

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Show / Hide Conservation and Alignment quality

		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.																																							.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	K	P	I	T	I	E	V	V	S	M	D	W	K	W	F	F	I	Y	P	E	Q	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	V	N	E	I	A	F	P	A	N	T	P	V	Y	F	K
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	A	D	V	T	V	K	V	T	G	Y	Q	W	Y	W	G	Y	E	Y	P	D	E	E	I	S	F	E	S	Y	M	I	G	S	P	A	T	G	G	D	N	R	M	S	P	E	V	E	Q	Q	L	I	E	A	G	Y	S	R	D	E	F	L	L	A	T	D	T	A	M	V	V	P	V	N	K	T	V	V	V	Q
Template Known Secondary structure					S									T	T							T	T	T	T							B	T	T	S	G	G	G	T			S	S												T	T			G	G	G	T	T	T		B	S	S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	S	N	S	V	M	N	S	F	F	I	P	R	L	G	S	Q	I	Y	A	M	A	G	M	Q	T	R	L	H	L	I	A	N	E	P	G	T	Y	D	G	I	S	A	S	Y	S	G	P	G	F	S	G	M	K	F	K	A	I	A	T	P	D	R	A	A	F	D	Q	W	V	A	K
Query Conservation
Alig confidence																																																															.
Template Conservation																																																															.
Template Sequence		V	T	G	A	D	V	I	H	S	W	T	V	P	A	F	G	V	K	Q	D	A	V	P	G	R	L	A	Q	L	W	F	R	A	E	R	E	G	I	F	F	G	Q	C	S	E	L	C	G	I	S	H	A	Y	M	P	I	T	V	K	V	V	.	S	E	E	A	Y	A	A	W	L	E	Q
Template Known Secondary structure					S	S	S							G	G	G	T							B	T											S										S			S	T	T	G	G	G									.
Template Predicted Secondary structure																																																															.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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