Job Description P0ABJ1 Confidence 99.91% Date Thu Jan 5 11:15:35 GMT 2012 Rank 14 Aligned Residues 93 % Identity 23% Template d2cuaa_ SCOP info Cupredoxin-like Cupredoxins Periplasmic domain of cytochrome c oxidase subunit II Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	P	I	T	I	E	V	V	S	M	D	W	K	W	F	F	I	Y	P	E	Q	G	I	A	T	V	N	E	I	A	F	P	A	N	T	P	V	Y	F	K	V	T	S	N	S	V	M	N	S	F	F	I	P	R	L	G	S	Q	I	Y	A	M	A	G	M	Q	T	R	L	H	L	I	A	N	E	P	G	T	Y
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	N	Q	Y	T	V	Y	V	L	A	F	A	F	G	Y	.	.	.	.	.	.	.	.	.	.	Q	P	N	P	I	E	V	P	Q	G	A	E	I	V	F	K	I	T	S	P	D	V	I	H	G	F	H	V	E	G	T	N	I	N	V	E	V	L	P	G	E	V	S	T	V	R	Y	T	F	K	R	P	G	E	Y
Template Known Secondary structure		T	T										T	T			.	.	.	.	.	.	.	.	.	.		S	S	S					T	T	S								B	S	S	S							T	T	S	S							B	T	B										S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90											.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	I	S	A	S	Y	S	G	P	G	F	S	G	M	K	F	K	A	I	A	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	I	C	N	Q	Y	C	G	L	G	H	Q	N	M	F	G	T	I	V	V	K	E
Template Known Secondary structure							S			S	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions