Job Description P0ABJ1 Confidence 100.00% Date Thu Jan 5 11:15:35 GMT 2012 Rank 10 Aligned Residues 115 % Identity 23% Template d1v54b1 SCOP info Cupredoxin-like Cupredoxins Periplasmic domain of cytochrome c oxidase subunit II Resolution 1.80

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	K	P	I	T	I	E	V	V	S	M	D	W	K	W	F	F	I	Y	P	E	Q	G	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	N	E	I	A	F	P	A	N	T	P	V	Y	F	K	V	T	S	N	S	V	M	N	S	F	F	I	P	R	L	G	S
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	N	P	S	L	T	V	K	T	M	G	H	Q	W	Y	W	S	Y	E	Y	T	D	Y	E	D	L	S	F	D	S	Y	M	I	P	T	S	E	L	K	P	G	E	L	R	L	L	E	V	D	N	R	V	V	L	P	M	E	M	T	I	R	M	L	V	S	S	E	D	V	L	H	S	W	A	V	P	S	L	G	L
Template Known Secondary structure					S									T	T								S	S	S								B			G	G	G			T	T			T	T	T		B	S	S						T	T	S									S	S	S							G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	Y	A	M	A	G	M	Q	T	R	L	H	L	I	A	N	E	P	G	T	Y	D	G	I	S	A	S	Y	S	G	P	G	F	S	G	M	K	F	K	A	I	A	T	P	D	R	A	A	F	D	Q	W	V	A	K	A
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		K	T	D	A	I	P	G	R	L	N	Q	T	T	L	M	S	S	R	P	G	L	Y	Y	G	Q	C	S	E	I	C	G	S	N	H	S	F	M	P	I	V	L	E	L	V	.	P	L	K	Y	F	E	K	W	S	A	S	M
Template Known Secondary structure							T	T										S	S										S			S	T	T	G	G	G									.												T
Template Predicted Secondary structure																																														.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions