Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABJ1
Confidence96.58%DateThu Jan 5 11:15:35 GMT 2012
Rank36Aligned Residues73
% Identity12%Templated1cc3a_
SCOP infoCupredoxin-like Cupredoxins Plastocyanin/azurin-like
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151..... ...160......... 170...... ...180.........190.....
Predicted Secondary structure 
.




......
............................













Query SS confidence 





.












. . . . . .






. . . . . . . . . . . . . . . . . . . . . . . . . . . .


















Query Sequence  NEIAFP. ANTPVYFKVTSNS. . . . . . VMNSFFI. . . . . . . . . . . . . . . . . . . . . . . . . . . . PRLGSQIYAMAGMQTRLHL
Query Conservation 


 

. 
 

 
 


 
......




 
............................
 
  
 




  
 
 
Alig confidence 





.












......






............................


















Template Conservation    
 
 



 
     
 
 

     

 

                                 
  
 



  


Template Sequence  NAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTF
Template Known Secondary structure  S
TT
S

SS


B

GGG
GGGTTS
TT
TT
S


B
TT
Template Predicted Secondary structure 



































Template SS confidence 















































































   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   196. ..200.........210.. .......220....
Predicted Secondary structure  ...







.





Query SS confidence 

. . .














.











Query Sequence  IA. . . NEPGTYDGISASYSG. PGFSGMKFKAIA
Query Conservation   
...
  
 
 
 


 

. 


 
 
 
 
Alig confidence 

...









.



.











Template Conservation    
     
 
 
 
.
 

 
   

 
 
 
Template Sequence  DVSKLKEGEQYMFFC. SELCGINHALMKGTLTL
Template Known Secondary structure  GGG

TT


.
S

STTGGG
Template Predicted Secondary structure 






.






Template SS confidence 
































   98.100.........110.. .......120.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions