Job Description P0ABJ1 Confidence 86.70% Date Thu Jan 5 11:15:35 GMT 2012 Rank 79 Aligned Residues 55 % Identity 11% Template c1sddB_ PDB info PDB header:blood clotting Chain: B: PDB Molecule:coagulation factor v; PDBTitle: crystal structure of bovine factor vai Resolution 2.80 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.												.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	F	P	A	N	T	P	V	Y	F	K	V	T	.	.	.	S	N	S	V	M	N	S	F	F	I	.	.	.	.	.	.	.	.	.	.	.	P	R	L	G	S	Q	I	Y	A	M	A	G	M	Q	T	R	L	H	L	I	A	N	E	P	G	T	Y	D	G	I	S
Query Conservation																.	.	.											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	M	Y	E	Q	E	W	V	R	L	H	L	L	N	L	G	G	S	R	D	I	H	V	V	H	F	H	G	Q	T	L	L	E	N	G	T	Q	Q	H	Q	L	G	V	W	P	L	L	P	G	S	F	K	T	L	E	M	K	A	S	K	P	G	W	W	L	L	D	T
Template Known Secondary structure						T	T													T	T								T	T							S	S	S					S	S					T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		1777	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions