Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABJ1
Confidence91.86%DateThu Jan 5 11:15:35 GMT 2012
Rank65Aligned Residues74
% Identity19%Templatec1kbwA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:major outer membrane protein pan 1; PDBTitle: crystal structure of the soluble domain of ania from2 neisseria gonorrhoeae
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160........ .170.........180... ......190.........200.........210..
Predicted Secondary structure 




..








................














Query SS confidence 

















. .














. . . . . . . . . . . . . . . .




























Query Sequence  NEIAFPANTPVYFKVTSN. . SVMNSFFIPRLGSQI. . . . . . . . . . . . . . . . YAMAGMQTRLHLIANEPGTYDGISASYSG
Query Conservation 


 

 
 

 
 


 ..





 

 
  
 ................




  
 
 
 

  
 
 
 


 

Alig confidence 

















..














................




























Template Conservation    
 
  

 

 



 
        
 

 
 

  

        

  
 

 
  
 
    

 
 
  
    
Template Sequence  NALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFR
Template Known Secondary structure  G
TT
SS

T

BSGGGSS

SBS
TT


S
SST
Template Predicted Secondary structure 

































Template SS confidence 















































































   214.....220.........230.........240.........250.........260.........270.........280.........290...
 
   213......220....
Predicted Secondary structure 





Query SS confidence 











Query Sequence  PGFSGMKFKAIA
Query Conservation   


 
 
 
 
Alig confidence 











Template Conservation      

   
 
Template Sequence  AFNKGALGQLKV
Template Known Secondary structure  S
Template Predicted Secondary structure 


Template SS confidence 











   294.....300.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions