Return to main results Retrieve Phyre Job Id

Job DescriptionP07117
Confidence3.48%DateThu Jan 5 11:00:11 GMT 2012
Rank41Aligned Residues87
% Identity14%Templatec3nkdB_
PDB info PDB header:immune systemChain: B: PDB Molecule:crispr-associated protein cas1; PDBTitle: structure of crisp-associated protein cas1 from escherichia coli str.2 k-12
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   289290.........300.........310.........320.........330.........340......... 350.........360.......
Predicted Secondary structure 












.





Query SS confidence 




























































.

















Query Sequence  GFFGIAYFNDHPALAGAVNQNAERVFIELAQILFNPWIAGILLSAILAAVMSTLSCQLLVC. SSAITEDLYKAFLRKHAS
Query Conservation 
                                       
     


  

  
 
   .
     

          
Alig confidence 




























































.











.




Template Conservation 
 


 

  
    
   


  




 








  
  

   



 




     

  



 
.

 
 
Template Sequence  GSRVRATYALLAKQYGVTWNGRRGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADII. KFDTV
Template Known Secondary structure  T


S




TT

TT

SSS
SSTT.TTTT
Template Predicted Secondary structure 





















.
Template SS confidence 















































































   142.......150.........160.........170.........180.........190.........200.........210..... ....220
 
   368.370......
Predicted Secondary structure 
Query SS confidence 








Query Sequence  QKELVWVGR
Query Conservation          
Alig confidence 








Template Conservation      
    
Template Sequence  VPKAFEIAR
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 








   229230.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions