Job Description P07117 Confidence 29.74% Date Thu Jan 5 11:00:11 GMT 2012 Rank 9 Aligned Residues 161 % Identity 17% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	M	S	T	L	S	C	Q	L	L	V	C	S	S	A	I	T	E	D	L	Y	K	A	F	L	R	K	H	A	S	Q	K	E	L	V	W	V	G	R	V	M	V	L	V	V	A	L	V	A	I	A	L	A	A	N	P	E	N	R	V	L	G	L	V	S	Y	A	W	A	G	F	G	A	A	F	G	P	V	V
Query Conservation
Alig confidence																																									.	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence		M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	G	K	A	S	I	V	D	M	A	N	A	.	.	.	.	A	L	A	G	G	V	A	I	G	S	V	C	N	I	V	G	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F
Template Known Secondary structure																												T	T	T											.	.	.	.	T	T							T	T	T	T	T	T	S																						T
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		417	.	.	420	.	.	.	.	.	.									.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.
Query Sequence		L	F	S	V	M	W	S	R	M	T	.	.	.	.	.	.	.	.	R	N	G	A	L	A	G	M	I	I	G	A	L	T	V	I	V	W	K	Q	F	G	W	L	G	L	Y	E	I	I	P	G	F	I	F	G	S	I	G	I	V	V	F	S	L	L	G	K	A	P	S	A	A	M	Q	K	R	F	A	E	A	D
Query Conservation												.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V	A	Q	L	T	G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	H	E
Template Known Secondary structure										S					T	T						T	T														S	T	T																													T	T				S	S	T	T		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		489	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	Y	H	S	A	P	P	S	R	L	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	H	L	A	G	P	E	D	E	H	K	A
Template Known Secondary structure		S	S	S				G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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