 |
| Job Description | P07117 | | Confidence | 2.92% | Date | Thu Jan 5 11:00:11 GMT 2012 |
| Rank | 55 | Aligned Residues | 24 |
| % Identity | 17% | Template | c2wlvA_ |
| PDB info |
PDB header:virus protein | Chain: A: PDB Molecule:gag polyprotein; |
PDBTitle: structure of the n-terminal capsid domain of hiv-2
|
| Resolution | 1.25 Å |
|
| | |
478 | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . |
| Predicted Secondary structure | |
 | | | | | | | | | | | | | | |
|
|
|
|
|
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
A | A | M | Q | K | R | F | A | E | A | D | A | H | Y | H | S | A | P | P | S | R | L | Q | E |
| Query Conservation | |
| | | | | | | | | | | | | | | | | | | | | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
|
|
| |
| |
|
|
|
| |
|
| | |
|
| |
| |
| |
| Template Sequence | |
E | I | I | N | E | E | A | A | E | W | D | V | Q | H | P | I | P | G | P | L | P | A | G | Q |
| Template Known Secondary structure | |
| | | | | | | | | | | | T |
|
|
|
|
|
|
|
| T | T | S |
| Template Predicted Secondary structure | |
| | | | | | | | | | | | |
|
|
|
|
|
|
|
|
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
