Job Description P0A903 Confidence 100.00% Date Thu Jan 5 11:09:04 GMT 2012 Rank 1 Aligned Residues 186 % Identity 99% Template c3tgoD_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:lipoprotein 34; PDBTitle: crystal structure of the e. coli bamcd complex Resolution 2.90 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	R	Y	K	R	Q	V	S	G	D	E	A	Y	L	E	A	A	P	L	A	E	L	H	A	P	A	G	M	I	L	P	V	T	S	G	D	Y	A	I	P	V	T	N	G	S	G	A	V	G	K	A	L	D	I	R	P	P	A	Q	P	L	A	L	V	S	G	A	R	T	Q	F	T	G	D	T	A	S	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	R	Y	K	R	Q	V	S	G	D	E	A	Y	L	E	A	A	P	L	A	E	L	H	A	P	A	G	M	I	L	P	V	T	S	G	D	Y	A	I	P	V	T	N	G	S	G	A	V	G	K	A	L	D	I	R	P	P	A	Q	P	L	A	L	V	S	G	A	R	T	Q	F	T	G	D	T	A	S	L	L
Template Known Secondary structure		.			G	G	G	S		S	S		S	G	G	G	G											T	T								S	T	T									S			G	G	G	S			S									S	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	N	G	R	G	N	T	L	W	P	Q	V	V	S	V	L	Q	A	K	N	Y	T	I	T	Q	R	D	D	A	G	Q	T	L	T	T	D	W	V	Q	W	N	R	L	D	E	D	E	Q	Y	R	G	R	Y	Q	I	S	V	K	P	Q	G	Y	Q	Q	A	V	T	V	K	L	L	N	L	E	Q	A	G	K	P
Query Conservation
Alig confidence			.	.	.	.
Template Conservation			.	.	.	.
Template Sequence		V	.	.	.	.	E	N	T	L	W	P	Q	V	V	S	V	L	Q	A	K	N	Y	T	I	T	Q	R	D	D	A	G	Q	T	L	T	T	D	W	V	Q	W	N	R	L	D	E	D	E	Q	Y	R	G	R	Y	Q	I	S	V	K	P	Q	G	Y	Q	Q	A	V	T	V	K	L	L	N	L	E	Q	A	G	K	P
Template Known Secondary structure			.	.	.	.																T								T	T	T	T												T	T		S	S													S	S	S														T	T
Template Predicted Secondary structure			.	.	.	.
Template SS confidence
		108					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	D	A	A	S	M	Q	R	Y	S	T	E	M	M	N	V	I	S	A	G	L	D	K	S	A	T	D	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	D	A	A	S	M	Q	R	Y	S	T	E	M	M	N	V	I	S	A	G	L	D	K	S	A	T	D	A	A
Template Known Secondary structure																															.
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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