Job Description P0A7Y0 Confidence 100.00% Date Thu Jan 5 11:06:26 GMT 2012 Rank 3 Aligned Residues 212 % Identity 27% Template c3c4tA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoribonuclease dicer; PDBTitle: structure of rnaseiiib and dsrna binding domains of mouse dicer Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		I	N	R	L	Q	R	K	L	G	Y	T	F	N	H	Q	E	L	L	Q	Q	A	L	T	H	R	S	A	S	S	K	.	.	.	H	N	E	R	L	E	F	L	G	D	S	I	L	S	Y	V	I	A	N	A	L	Y	H	R	F	P	R	V	D	E	G	D	M	S	R	M	R	A	T	L	V	R	G	N	T	L	A
Query Conservation																																.	.	.
Alig confidence																																.	.	.
Template Conservation
Template Sequence		F	E	T	F	E	K	K	I	N	Y	R	F	K	N	K	A	Y	L	L	Q	A	F	T	H	A	S	Y	H	Y	N	T	I	T	D	Y	Q	R	L	E	F	L	G	D	A	I	L	D	Y	L	I	T	K	H	L	Y	E	D	P	R	Q	H	S	P	G	V	L	T	D	L	R	S	A	L	V	N	N	T	I	F	A
Template Known Secondary structure									T	T				S	S									B		S	S		T	T			S																										T	T															S
Template Predicted Secondary structure
Template SS confidence
		1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.															.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	A	R	E	F	E	L	G	E	C	L	R	L	G	P	G	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	G	G	F	R	R	E	S	I	L	A	D	T	V	E	A	L	I	G	G	V	F	L	D	S	D	I	Q	T	V	E	K	L	I	L	N	W	Y	Q	T	R	L	D	E	I	S
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation																																																																.	.
Template Sequence		S	L	A	V	K	Y	D	Y	H	K	Y	F	K	A	V	S	P	E	L	F	H	V	I	D	D	F	V	K	F	Q	L	E	K	N	E	E	D	I	E	V	P	K	A	M	G	D	I	F	E	S	L	A	G	A	I	Y	M	D	S	G	M	S	.	.	L	E	V	V	W	Q	V	Y	Y	P	M	M	Q	P	L	I
Template Known Secondary structure							T	T	G	G	G	S		B																				T	T								T																	T	T	S		.	.
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		1731	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.			.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	D	K	Q	K	D	P	K	T	R	L	Q	E	Y	L	Q	G	R	H	L	P	L	P	T	Y	L	V	V	Q	V	R	G	E	A	H	D	Q	E	F	T	I	H	C	Q	V	S	G	L	S	E	P	V	V	G	T	G	S	S	R	R	K	A	E	Q	A	A	A	E	Q	A	L	K	K	L	E
Query Conservation
Alig confidence																			.	.	.	.																												.
Template Conservation																			.	.	.	.																												.
Template Sequence		E	K	F	S	A	N	V	P	R	S	P	V	R	E	L	L	E	.	.	.	.	M	E	P	E	T	A	K	F	S	P	A	E	R	T	Y	D	G	K	V	R	V	T	V	E	V	V	G	.	K	G	K	F	K	G	V	G	R	S	Y	R	I	A	K	S	A	A	A	R	R	A	L	R	S	L	K
Template Known Secondary structure						T	T	S											.	.	.	.		S	S	S	S										T	T	S									T	T	.	T								S	S																T
Template Predicted Secondary structure																			.	.	.	.																												.
Template SS confidence
		1827	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.					.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870		.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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