Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7Y0
Confidence99.39%DateThu Jan 5 11:06:26 GMT 2012
Rank16Aligned Residues72
% Identity32%Templatec3adlA_
PDB info PDB header:gene regulation/rnaChain: A: PDB Molecule:risc-loading complex subunit tarbp2; PDBTitle: structure of trbp2 and its molecule implications for mirna processing
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160.........170.........180.........190.........200.........210.........220....
Predicted Secondary structure 


























Query SS confidence 









































































Query Sequence  DKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE
Query Conservation           
                    
      
 
 
 
 
      
 
 


 

  

  

  

Alig confidence 













































..

























Template Conservation 
   



 
 
  

     
 
      
      
   
    ..    
 
 


 

  

  

  
 
Template Sequence  PRGSHEVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVER. . FIEIGSGTSKKLAKRNAAAKMLLRVH
Template Known Secondary structure 
TT

TT



S
TTS
TT..SS
Template Predicted Secondary structure 
















..



Template SS confidence 









































































   155....160.........170.........180.........190.........200 .........210.........220......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions