Job Description P0A7Y0 Confidence 12.58% Date Thu Jan 5 11:06:26 GMT 2012 Rank 62 Aligned Residues 49 % Identity 14% Template c2zkqe_ PDB info PDB header:ribosomal protein/rna Chain: E: PDB Molecule:rna expansion segment es6 part ii; PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		L	V	V	Q	V	R	G	E	A	H	D	Q	E	F	T	I	H	C	Q	V	.	.	.	S	G	L	S	E	P	V	V	G	T	G	S	S	R	R	K	A	E	Q	A	A	A	E	Q	A	L	K	K	L
Query Conservation																						.	.	.
Alig confidence																						.	.	.
Template Conservation
Template Sequence		P	V	Q	K	Q	T	R	A	G	Q	R	T	R	F	K	A	F	V	A	I	G	D	H	N	G	H	V	G	L	G	V	K	C	S	K	E	V	A	T	A	I	R	G	A	I	I	L	A	K	L	S	I
Template Known Secondary structure						B		S	S		B													S	S	S										S	S															S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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