Job Description P0A7Y0 Confidence 100.00% Date Thu Jan 5 11:06:26 GMT 2012 Rank 2 Aligned Residues 213 % Identity 38% Template c1yywB_ PDB info PDB header:hydrolase/rna Chain: B: PDB Molecule:ribonuclease iii; PDBTitle: crystal structure of rnase iii from aquifex aeolicus2 complexed with double stranded rna at 2.8-angstrom3 resolution Resolution 2.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		V	I	N	R	L	Q	R	K	L	G	Y	T	F	N	H	Q	E	L	L	Q	Q	A	L	T	H	R	S	A	S	S	K	.	H	N	E	R	L	E	F	L	G	D	S	I	L	S	Y	V	I	A	N	A	L	Y	H	R	F	P	R	V	D	E	G	D	M	S	R	M	R	A	T	L	V	R	G	N	T	L	A	E
Query Conservation																																	.
Alig confidence																																	.
Template Conservation
Template Sequence		M	L	E	Q	L	E	K	K	L	G	Y	T	F	K	D	K	S	L	L	E	K	A	L	T	H	V	S	Y	S	K	K	E	H	Y	E	T	L	E	F	L	G	D	A	L	V	N	F	F	I	V	D	L	L	V	Q	Y	S	P	N	K	R	E	G	F	L	S	P	L	K	A	Y	L	I	S	E	E	F	F	N	L
Template Known Secondary structure		T	T								T				S	S									B		T	T	T		T	T	S		T																								S	S														T	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																															.	.																			.
Query SS confidence																																															.	.																			.
Query Sequence		L	A	R	E	F	E	L	G	E	C	L	R	L	G	P	G	E	L	K	S	G	G	F	R	R	E	S	I	L	A	D	T	V	E	A	L	I	G	G	V	F	L	D	S	D	.	.	I	Q	T	V	E	K	L	I	L	N	W	Y	Q	T	R	L	D	E	.	I	S	P	G	D	K	Q	K	D	P	K	T	R	L
Query Conservation																																															.	.																			.
Alig confidence																		.	.	.	.	.	.																								.	.																			.
Template Conservation																		.	.	.	.	.	.
Template Sequence		L	A	Q	K	L	E	L	H	K	F	I	R	I	K	R	G	.	.	.	.	.	.	K	I	N	E	T	I	I	G	D	V	F	E	A	L	W	A	A	V	Y	I	D	S	G	R	D	A	N	F	T	R	E	L	F	Y	K	L	F	K	E	D	I	L	S	A	I	K	E	G	R	V	K	K	D	Y	K	T	I	L
Template Known Secondary structure				T	T	T	T						B			S	S	.	.	.	.	.	.																						T	T	S																								T			S	S
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	Y	L	Q	G	R	H	L	P	L	P	T	Y	L	V	V	Q	V	R	G	E	A	H	D	Q	E	F	T	I	H	C	Q	V	S	G	L	S	E	P	V	V	G	T	G	S	S	R	R	K	A	E	Q	A	A	A	E	Q	A	L	K	K	L	E	L
Query Conservation
Alig confidence																																						.	.
Template Conservation																																						.	.
Template Sequence		Q	E	I	T	Q	K	R	W	K	E	R	P	E	Y	R	L	I	S	V	E	G	P	H	H	K	K	K	F	I	V	E	A	K	I	K	E	.	.	Y	R	T	L	G	E	G	K	S	K	K	E	A	E	Q	R	A	A	E	E	L	I	K	L	L	E	E
Template Known Secondary structure										S										S			T	T	S											T	T	.	.								S	S	T	T																T
Template Predicted Secondary structure																																						.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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