Job Description P0A7Y0 Confidence 100.00% Date Thu Jan 5 11:06:26 GMT 2012 Rank 1 Aligned Residues 219 % Identity 36% Template c1o0wB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:ribonuclease iii; PDBTitle: crystal structure of ribonuclease iii (tm1102) from2 thermotoga maritima at 2.0 a resolution Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.											.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	N	R	L	Q	R	K	L	G	Y	T	F	N	H	Q	E	L	L	Q	Q	A	L	T	H	R	S	A	.	.	.	.	.	.	.	.	.	.	S	S	K	H	N	E	R	L	E	F	L	G	D	S	I	L	S	Y	V	I	A	N	A	L	Y	H	R	F	P	R	V	D	E	G	D	M	S	R	M	R	A	T
Query Conservation																														.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	E	E	F	Q	K	E	T	G	I	N	F	K	N	E	E	L	L	F	R	A	L	C	H	S	S	Y	A	N	E	Q	N	Q	A	G	R	K	D	V	E	S	N	E	K	L	E	F	L	G	D	A	V	L	E	L	F	V	C	E	I	L	Y	K	K	Y	P	E	A	E	V	G	D	L	A	R	V	K	S	A
Template Known Secondary structure															S	S									B											T	T		T	T				S																								T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	R	G	N	T	L	A	E	L	A	R	E	F	E	L	G	E	C	L	R	L	G	P	G	E	L	K	S	G	G	F	R	R	E	S	I	L	A	D	T	V	E	A	L	I	G	G	V	F	L	D	S	D	I	Q	T	V	E	K	L	I	L	N	W	Y	Q	T	R	L	D	E	I	S	P	G	D	K	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	S	E	E	V	L	A	M	V	S	R	K	M	N	L	G	K	F	L	F	L	G	K	G	E	E	K	T	G	G	R	D	R	D	S	I	L	A	D	A	F	E	A	L	L	A	A	I	Y	L	D	Q	G	Y	E	K	I	K	E	L	F	E	Q	E	F	E	F	Y	I	E	K	I	M	K	G	E	M	L	F
Template Known Secondary structure			T	S											T	T	G	G	G	T		B								T	T	G	G	G																																										T	T				S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	K	T	R	L	Q	E	Y	L	Q	G	R	H	L	P	L	P	T	Y	L	V	V	Q	V	R	G	E	A	H	D	Q	E	F	T	I	H	C	Q	V	S	G	L	S	E	P	V	V	G	T	G	S	S	R	R	K	A	E	Q	A	A	A	E	Q	A	L	K	K	L	E
Query Conservation
Alig confidence																																												.
Template Conservation																																												.
Template Sequence		D	Y	K	T	A	L	Q	E	I	V	Q	S	E	H	K	V	P	P	E	Y	I	L	V	R	T	E	K	N	D	G	D	R	I	F	V	V	E	V	R	V	N	G	.	K	T	I	A	T	G	K	G	R	T	K	K	E	A	E	K	E	A	A	R	I	A	Y	E	K	L	L
Template Known Secondary structure																S	S													S	S	S										T	T	.									S	S																S
Template Predicted Secondary structure																																												.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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