Return to main results Retrieve Phyre Job Id

Job DescriptionP39220
Confidence4.88%DateThu Jan 5 11:58:32 GMT 2012
Rank77Aligned Residues27
% Identity22%Templated2j9ua1
SCOP infoFour-helical up-and-down bundle VPS28 C-terminal domain-like VPS28 C-terminal domain-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   81........90.........100.......
Predicted Secondary structure 




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Query Sequence  NENEREKFINSLELFNKLKTCAKNPDE
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Template Sequence  DFENRSKLIDWIVRINKLSIGDTLTET
Template Known Secondary structure 

TTTS
TT
B

Template Predicted Secondary structure 










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   195....200.........210.........220.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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