Job Description P39220 Confidence 7.13% Date Thu Jan 5 11:58:32 GMT 2012 Rank 42 Aligned Residues 67 % Identity 15% Template d2cqka1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain La domain Resolution UNK

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	T	E	A	Y	K	L	L	F	N	F	V	N	N	Q	T	G	N	I	N	A	S	E	Y	F	T	G	A	I	N	E	N	E	R	E	K	F	I	N	S	L	E	L	F	N	K	L	K	T	C	A	K	N	P	D	E	L	V	A	K	G	N	M	R	W	V	A	Q	T	F	G	D	I	E	L	S
Query Conservation
Alig confidence														.	.	.																	.																																		.	.	.	.	.	.
Template Conservation														.	.	.																	.																																		.	.	.	.	.	.
Template Sequence		K	E	C	L	K	K	Q	L	E	F	C	F	.	.	.	S	R	E	N	L	S	K	D	L	Y	L	I	S	Q	M	D	.	S	D	Q	F	I	P	I	W	T	V	A	N	M	E	E	I	K	K	L	T	T	D	P	D	L	I	L	E	V	L	R	S	S	.	.	.	.	.	.	P	M	V	Q	V	D
Template Known Secondary structure													T	.	.	.	S														S		.	T	T	S																														S	.	.	.	.	.	.	S	S
Template Predicted Secondary structure														.	.	.																	.																																		.	.	.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110							.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions