Return to main results Retrieve Phyre Job Id

Job DescriptionP39220
Confidence13.14%DateThu Jan 5 11:58:32 GMT 2012
Rank16Aligned Residues25
% Identity48%Templated1i8na_
SCOP infoHairpin loop containing domain-like Hairpin loop containing domain-like Anti-platelet protein
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190.........200.........210.
Predicted Secondary structure 

















Query SS confidence 


































Query Sequence  GSNDILYERPGWNANLGVLPRTVLPRTVLTRTVLT
Query Conservation                                     
Alig confidence 












..........











Template Conservation 












..........











Template Sequence  GNEDCWSKRPGWK. . . . . . . . . . LPDNLLTKTEFT
Template Known Secondary structure  SSST
B..........

GGG
S

Template Predicted Secondary structure 









..........







Template SS confidence 


































   42.......50.... .....60......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions