Job Description P39220 Confidence 9.09% Date Thu Jan 5 11:58:32 GMT 2012 Rank 28 Aligned Residues 27 % Identity 26% Template c3ifuA_ PDB info PDB header:transcription Chain: A: PDB Molecule:non-structural protein; PDBTitle: the crystal structure of porcine reproductive and2 respiratory syndrome virus (prrsv) leader protease nsp1 Resolution 2.42 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	K	M	V	S	G	D	K	M	D	V	K	M	N	I	F	Q	R	L	W	E	T	L	R	H	L	F	W	S	D	K
Query Conservation
Alig confidence											.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		I	A	R	M	T	S	G	N	L	.	.	.	.	.	N	F	Q	Q	R	M	V	R	V	A	A	E	I	Y	R	A	G	Q
Template Known Secondary structure						T			G	G	.	.	.	.	.	G																T	S
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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